RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 AP1B1Q10567 949 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 ZBTB17Q13105 803 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 ZNF211Q13398 564 aaPredicted RBP9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 PTK2BQ14289 1009 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 NFATC4Q14934 902 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 IFI16Q16666 785 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 ODF2Q5BJF6 829 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 ARMC12Q5T9G4 340 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 DOK6Q6PKX4 331 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 MACC1Q6ZN28 852 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 MAP7D3Q8IWC1 876 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 CCDC13Q8IYE1 715 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 FAM71BQ8TC56 605 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 IFI44Q8TCB0 444 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 HCAR2Q8TDS4 363 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 PTCD2Q8WV60 388 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 RFFLQ8WZ73 363 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 OR1E3Q8WZA6 343 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 HAUS1Q96CS2 278 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 NUS1Q96E22 293 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 RNF157Q96PX1 679 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 MAK16Q9BXY0 300 aaKnown RBP9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 SLC13A1Q9BZW2 595 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 BRD8Q9H0E9 1235 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 FGF22Q9HCT0 170 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 NLGN3Q9NZ94 848 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 DTLQ9NZJ0 730 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 RCOR3Q9P2K3 495 aaPredicted RBP9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 SAE1Q9UBE0 346 aaPredicted RBP9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 KLQ9UEF7 1012 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 PCDHB1Q9Y5F3 818 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 AK5Q9Y6K8 562 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 RP1P56715 2156 aa9.5□□□□□ -0.89
NSMCE1-203ENST00000562039 ACACAQ13085 2346 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 NEMP2A6NFY4 417 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 APOL1O14791 398 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 MATN3O15232 486 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 HTRA2O43464 458 aaPredicted RBP9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 HEXIM1O94992 359 aaKnown RBP9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 MT-CO3P00414 261 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 SLC4A1P02730 911 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 CCNB1P14635 433 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 ACP1P24666 158 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 HTR1BP28222 390 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 MAN1A1P33908 653 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 HNF1BP35680 557 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 HSPA9P38646 679 aaKnown RBP9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 CD86P42081 329 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 POLD2P49005 469 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 MARCKSL1P49006 195 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 SUOXP51687 545 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 EPHB1P54762 984 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 SRP54P61011 504 aaKnown RBP9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 YPEL5P62699 121 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 CAMK2BQ13554 666 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 ARHGEF7Q14155 803 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 PERM1Q5SV97 790 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 SARM1Q6SZW1 724 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 MFSD7Q6UXD7 560 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 Q6ZVL8 140 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 TRIM74Q86UV6 250 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 ZSCAN30Q86W11 494 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 TMPRSS12Q86WS5 348 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 SLC35F3Q8IY50 421 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 TEX26Q8N6G2 289 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 PLD5Q8N7P1 536 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 LPCAT1Q8NF37 534 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 CCL4L1Q8NHW4 92 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 FAM174AQ8TBP5 190 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 MAPK15Q8TD08 544 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 HNRNPLLQ8WVV9 542 aaKnown RBP9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 PIH1D2Q8WWB5 315 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 FAF2Q96CS3 445 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 IFT43Q96FT9 208 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 WDR92Q96MX6 357 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 DCBLD2Q96PD2 775 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 AGAP2Q99490 1192 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 POLR1EQ9GZS1 481 aaKnown RBP9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 CYP4F12Q9HCS2 524 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 PHTF1Q9UMS5 762 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 PCDHGA1Q9Y5H4 931 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 PCDHA13Q9Y5I0 950 aa9.49□□□□□ -0.89
NSMCE1-203ENST00000562039 KMT2BQ9UMN6 2715 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 URB1O60287 2271 aaKnown RBP9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 RCCD1A6NED2 376 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 C3orf70A6NLC5 250 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 CACNB4O00305 520 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 OPA1O60313 960 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 SOCS5O75159 536 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 TNFP01375 233 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 CAPNS1P04632 268 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 C1SP09871 688 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 PIRTP0C851 137 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 CYP2A6P11509 494 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 CKMT1AP12532 417 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 PECAM1P16284 738 aaPredicted RBP9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 TGM2P21980 687 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 CCNCP24863 283 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 HK3P52790 923 aa9.48□□□□□ -0.89
NSMCE1-203ENST00000562039 NAP1L1P55209 391 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms