RNA–Protein interactions for RNA: ENST00000560878.1

SPG21-212, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-212ENST00000560878 LRRD1A4D1F6 860 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 TBC1D3FA6NER0 549 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 TBC1D3LB9A6J9 549 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 RASA4BC9J798 803 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 PROB1E7EW31 1015 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 FAM72CH0Y354 149 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 HRKO00198 91 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 KRIT1O00522 736 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 DCLK1O15075 740 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 RASA4O43374 803 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 KDELR3O43731 214 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 LRCH4O75427 683 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 PALMO75781 387 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 FSBPO95073 299 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 PCDH8O95206 1070 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 NDUFA10O95299 355 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 POP4O95707 220 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 IGSF6O95976 241 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 TBC1D3HP0C7X1 549 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 IMPDH2P12268 514 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 NME1P15531 152 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 ZFXP17010 805 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 GOT1P17174 413 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 GABRG2P18507 467 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 ENDOUP21128 410 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 C5AR1P21730 350 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 PRKCHP24723 683 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 NFKBIAP25963 317 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 CTNNA2P26232 953 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 CD6P30203 668 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 SLC1A1P43005 524 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 KIR2DL2P43627 348 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 HCAR3P49019 387 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 STK19P49842 368 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 TPMTP51580 245 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 RENBPP51606 427 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 NDST2P52849 883 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 C21orf59P57076 290 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 RHOAP61586 193 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 CLCQ05315 142 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 ITKQ08881 620 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 DMWDQ09019 674 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 TBX2Q13207 712 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 EIF4EBP2Q13542 120 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 ELAVL3Q14576 367 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 ZNF235Q14590 738 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 GRM3Q14832 879 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 CST6Q15828 149 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 C5orf22Q49AR2 442 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 ALFQ53S48 1182 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 SLC45A4Q5BKX6 768 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 SPDYCQ5MJ68 293 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 TMCO4Q5TGY1 634 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 FAM72AQ5TYM5 149 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 TMEM215Q68D42 235 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 TBC1D3GQ6DHY5 549 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 TBC1D3CQ6IPX1 549 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 FAM72DQ6L9T8 149 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 CXorf57Q6NSI4 855 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 TRNP1Q6NT89 227 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 KIAA1211LQ6NV74 962 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 LINGO4Q6UY18 593 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 RFX8Q6ZV50 586 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 BZW1Q7L1Q6 419 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 KIAA0907Q7Z7F0 614 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 PRPF39Q86UA1 669 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 FAM72BQ86X60 149 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 RHOT1Q8IXI2 618 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 KIAA2013Q8IYS2 634 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 MAML2Q8IZL2 1156 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 TBC1D3Q8IZP1 549 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 SYCE1Q8N0S2 351 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 PYROXD2Q8N2H3 581 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 STK40Q8N2I9 435 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 HDDC3Q8N4P3 179 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 SH2D3CQ8N5H7 860 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 ATPAF2Q8N5M1 289 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 DEFB119Q8N690 84 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 PCDH20Q8N6Y1 951 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 TC2NQ8N9U0 490 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 CCNYQ8ND76 341 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 CCDC112Q8NEF3 446 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 OR7D4Q8NG98 312 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 OR14C36Q8NHC7 312 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 CEP76Q8TAP6 659 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 TEKT4Q8WW24 435 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 CASKIN2Q8WXE0 1202 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 ARHGEF2Q92974 986 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 TRIM44Q96DX7 344 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 MYEOVQ96EZ4 313 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 TOE1Q96GM8 510 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 EAF1Q96JC9 268 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 MRGPRX1Q96LB2 322 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 GDAP1L1Q96MZ0 367 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 SNRNP25Q9BV90 132 aaKnown RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 CINPQ9BW66 212 aaPredicted RBP4.89□□□□□ -1.63
SPG21-212ENST00000560878 GPR174Q9BXC1 333 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 TSGA10Q9BZW7 698 aa4.89□□□□□ -1.63
SPG21-212ENST00000560878 ARRDC1-AS1Q9H2J1 176 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms