RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 RFLNAQ6ZTI6 216 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 ERMP1Q7Z2K6 904 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 KANSL1Q7Z3B3 1105 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 KDELC2Q7Z4H8 507 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 PELI3Q8N2H9 469 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 UBL4BQ8N7F7 174 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 PLA2G15Q8NCC3 412 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 SPATA22Q8NHS9 363 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 SAP25Q8TEE9 199 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 SETD7Q8WTS6 366 aaKnown RBP12.12□□□□□ -0.47
USP8-212ENST00000560730 TADA1Q96BN2 335 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 IMP4Q96G21 291 aaKnown RBP12.12□□□□□ -0.47
USP8-212ENST00000560730 TEKT5Q96M29 485 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 COQ10AQ96MF6 247 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 MCCC1Q96RQ3 725 aaPredicted RBP12.12□□□□□ -0.47
USP8-212ENST00000560730 GLOD4Q9HC38 313 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 PCOLCE2Q9UKZ9 415 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 PNMA8BQ9ULN7 279 aaPredicted RBP12.12□□□□□ -0.47
USP8-212ENST00000560730 PPP2R2CQ9Y2T4 447 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 PCDHGB2Q9Y5G2 931 aa12.12□□□□□ -0.47
USP8-212ENST00000560730 A0A0J9YYE9 177 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 SPTY2D1-AS1A0A0U1RR47 76 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 CFAP69A5D8W1 941 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 HACD1B0YJ81 288 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 F5H423 210 aaPredicted RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 H7C0C1 242 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 SDC3O75056 442 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 HEXIM1O94992 359 aaKnown RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 MT-CYBP00156 380 aaPredicted RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 TRBC1P01850 177 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 RBL1P28749 1068 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 EPHA8P29322 1005 aaPredicted RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 RABIFP47224 123 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 ATP5OP48047 213 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 ARRB1P49407 418 aaPredicted RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 PDE1CQ14123 709 aaPredicted RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 INPP5AQ14642 412 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 ACOX1Q15067 660 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 QPCTQ16769 361 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 CCDC181Q5TID7 509 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 DENND2CQ68D51 928 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 CRTC1Q6UUV9 634 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 ZNF662Q6ZS27 426 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 HSD11B1LQ7Z5J1 315 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 ZNF567Q8N184 647 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 LPCAT1Q8NF37 534 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 FAM174AQ8TBP5 190 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 RHBDD1Q8TEB9 315 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 FUBP1Q96AE4 644 aaKnown RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 C1QTNF7Q9BXJ2 289 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 SLC25A51Q9H1U9 297 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 KCNF1Q9H3M0 494 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 PCDH9Q9HC56 1237 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 HAUS2Q9NVX0 235 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 UBP1Q9NZI7 540 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 KLF15Q9UIH9 416 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 R3HDM2Q9Y2K5 976 aaKnown RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 LRP4O75096 1905 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 FLRT2O43155 660 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 TJP3O95049 919 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 PCCBP05166 539 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 CYP2A6P11509 494 aaPredicted RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 NFKB1P19838 968 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 CETN2P41208 172 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 EPHB1P54762 984 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 EIF3EP60228 445 aaKnown RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 EIF2B5Q13144 721 aaKnown RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 XRCC4Q13426 336 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 SUZ12Q15022 739 aaKnown RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 MEI1Q5TIA1 1274 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 Q6ZVL8 140 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 USP45Q70EL2 814 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 DCP2Q8IU60 420 aaKnown RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 SLC25A45Q8N413 288 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 BAHD1Q8TBE0 780 aaPredicted RBP12.11□□□□□ -0.47
USP8-212ENST00000560730 HTR3CQ8WXA8 447 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 TRIB3Q96RU7 358 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 SLC32A1Q9H598 525 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 UCKL1Q9NWZ5 548 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 DNAJC28Q9NX36 388 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 OR1A2Q9Y585 309 aa12.11□□□□□ -0.47
USP8-212ENST00000560730 K7ESM1 405 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 MTSS1O43312 755 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 PMPCBO75439 489 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 ITGAVP06756 1048 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 PIRTP0C851 137 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 RBP3P10745 1247 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 DGKAP23743 735 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 ETV3P41162 512 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 RPL26P61254 145 aaKnown RBP12.1□□□□□ -0.47
USP8-212ENST00000560730 YPEL5P62699 121 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 SIM1P81133 766 aaPredicted RBP12.1□□□□□ -0.47
USP8-212ENST00000560730 PTSQ03393 145 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 KLF1Q13351 362 aaPredicted RBP12.1□□□□□ -0.47
USP8-212ENST00000560730 GALNT3Q14435 633 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 TRIP6Q15654 476 aaKnown RBP12.1□□□□□ -0.47
USP8-212ENST00000560730 PCSK7Q16549 785 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 CDKN3Q16667 212 aa12.1□□□□□ -0.47
USP8-212ENST00000560730 LRRC66Q68CR7 880 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms