RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 SLC25A11Q02978 314 aaKnown RBP14.13□□□□□ -0.15
TPM1-223ENST00000560445 EIF3IQ13347 325 aaKnown RBP14.13□□□□□ -0.15
TPM1-223ENST00000560445 SPIDRQ14159 915 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 SLC18A3Q16572 532 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 IFI16Q16666 785 aaKnown RBP14.13□□□□□ -0.15
TPM1-223ENST00000560445 ODF2Q5BJF6 829 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 ZFYVE27Q5T4F4 411 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 ARMC12Q5T9G4 340 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 C19orf48Q6RUI8 117 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 IGF2-ASQ6U949 168 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 LIPIQ6XZB0 460 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 NETO2Q8NC67 525 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 KCTD6Q8NC69 237 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 OR8K1Q8NGG5 319 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 KIAA1524Q8TCG1 905 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 NUS1Q96E22 293 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 RBM15Q96T37 977 aaKnown RBP eCLIP14.13□□□□□ -0.152e-7■■□□□ 13.8
TPM1-223ENST00000560445 KLF15Q9UIH9 416 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 COQ6Q9Y2Z9 468 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 OR1A2Q9Y585 309 aa14.13□□□□□ -0.15
TPM1-223ENST00000560445 LY6G6EA0A0G2JKS1 128 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 SSU72P8A0A1W2PR75 194 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 AKR1B10O60218 316 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 MAFKO60675 156 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 PROSCO94903 275 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 MYCLP1P12525 358 aaPredicted RBP14.12□□□□□ -0.15
TPM1-223ENST00000560445 TEAD1P28347 426 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 CASP14P31944 242 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 RGRP47804 291 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 EPHB1P54762 984 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 RPL26P61254 145 aaKnown RBP14.12□□□□□ -0.15
TPM1-223ENST00000560445 RALGDSQ12967 914 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 C1orf61Q13536 156 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 ISXQ2M1V0 245 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 ALG11Q2TAA5 492 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 TPRG1LQ5T0D9 272 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 GUSBP11Q6P575 273 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 ARHGAP36Q6ZRI8 547 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 RD3Q7Z3Z2 195 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 SLC35F3Q8IY50 421 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 RAVER1Q8IY67 606 aaKnown RBP14.12□□□□□ -0.15
TPM1-223ENST00000560445 ARL14Q8N4G2 192 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 PCDH19Q8TAB3 1148 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 FAM71BQ8TC56 605 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 LGMNQ99538 433 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 STRADBQ9C0K7 418 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 B4GALT6Q9UBX8 382 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 RPL26L1Q9UNX3 145 aaKnown RBP14.12□□□□□ -0.15
TPM1-223ENST00000560445 GPR34Q9UPC5 381 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 U3KQA8 63 aa14.12□□□□□ -0.15
TPM1-223ENST00000560445 ZNF487B1APH4 448 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 GCATO75600 419 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 HEXIM1O94992 359 aaKnown RBP14.11□□□□□ -0.15
TPM1-223ENST00000560445 ZNF30P17039 623 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 ITIH2P19823 946 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 CR2P20023 1033 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 TRIM23P36406 574 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 GARSP41250 739 aaKnown RBP14.11□□□□□ -0.15
TPM1-223ENST00000560445 CLDN6P56747 220 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 ITKQ08881 620 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 GALNT2Q10471 571 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 ILF3Q12906 894 aaKnown RBP eCLIP14.11□□□□□ -0.15
TPM1-223ENST00000560445 PAFAH1B3Q15102 231 aaKnown RBP14.11□□□□□ -0.15
TPM1-223ENST00000560445 LRRK1Q38SD2 2015 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 PNCKQ6P2M8 343 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 ZSWIM9Q86XI8 627 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 VSIG1Q86XK7 387 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 RHOT2Q8IXI1 618 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 TSACCQ96A04 125 aaPredicted RBP14.11□□□□□ -0.15
TPM1-223ENST00000560445 SCRN2Q96FV2 425 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 TMEM74Q96NL1 305 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 MCCC1Q96RQ3 725 aaPredicted RBP14.11□□□□□ -0.15
TPM1-223ENST00000560445 DNAJC7Q99615 494 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 GSDMCQ9BYG8 508 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 XPO4Q9C0E2 1151 aaKnown RBP14.11□□□□□ -0.15
TPM1-223ENST00000560445 SYNDIG1Q9H7V2 258 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 GULP1Q9UBP9 304 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 PCDHGA8Q9Y5G5 932 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 WDFY3Q8IZQ1 3526 aa14.11□□□□□ -0.15
TPM1-223ENST00000560445 ITPR1Q14643 2758 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 CCDC187A0A096LP49 1063 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 MATN3O15232 486 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 PGLSO95336 258 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 TMEM253P0C7T8 217 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 PNLIPP16233 465 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 CCNCP24863 283 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 ARHGAP25P42331 645 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 BIRC2Q13490 618 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 TAF8Q7Z7C8 310 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 CNGA4Q8IV77 575 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 TEX26Q8N6G2 289 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 WDR36Q8NI36 951 aaKnown RBP14.1□□□□□ -0.15
TPM1-223ENST00000560445 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.1□□□□□ -0.15
TPM1-223ENST00000560445 FUBP1Q96AE4 644 aaKnown RBP14.1□□□□□ -0.15
TPM1-223ENST00000560445 TMEM159Q96B96 161 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 DTD2Q96FN9 168 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 CCDC42Q96M95 316 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 COQ10AQ96MF6 247 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 TSGA13Q96PP4 275 aa14.1□□□□□ -0.15
TPM1-223ENST00000560445 GFM1Q96RP9 751 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms