RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GRSF1Q12849 480 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 OR4K2Q8NGD2 314 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 OR6Y1Q8NGX8 325 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 HERVK_113Q902F9 699 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 GDF3Q9NR23 364 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 SOWAHBA6NEL2 793 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 ITGA2BP08514 1039 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 SPDYCQ5MJ68 293 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 UBE2R2Q712K3 238 aaPredicted RBP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 GLOD4Q9HC38 313 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 ELOVL2Q9NXB9 296 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 KCNK4Q9NYG8 393 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 KLHL3Q9UH77 587 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 VWA7Q9Y334 891 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 PRMT5O14744 637 aaPredicted RBP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 C4BPAP04003 597 aaKnown RBP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 NUP62P37198 522 aaPredicted RBP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 HK2P52789 917 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 FPGSQ05932 587 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 RFWD3Q6PCD5 774 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 RHBDF2Q6PJF5 856 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 C1orf127Q8N9H9 656 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 TEKT5Q96M29 485 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 C9orf16Q9BUW7 83 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 SEZ6LQ9BYH1 1024 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 ERVW-1Q9UQF0 538 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 KLRG2A4D1S0 409 aaPredicted RBP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 CILPO75339 1184 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 SNUPNO95149 360 aaKnown RBP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 SNRPB2P08579 225 aaKnown RBP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 ACRP10323 421 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 PTPN9P43378 593 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 ACLYP53396 1101 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 TAS2R40P59535 323 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 KRR1Q13601 381 aaKnown RBP13.49□□□□□ -0.25
TRAF3-208ENST00000560371 LIPMQ5VYY2 423 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 TNS4Q8IZW8 715 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 OR8H2Q8N162 312 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 TERB1Q8NA31 727 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 BAP1Q92560 729 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 RAI2Q9Y5P3 530 aa13.49□□□□□ -0.25
TRAF3-208ENST00000560371 PIPSLA2A3N6 862 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 PER2O15055 1255 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 PIK3R1P27986 724 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 OASLQ15646 514 aaKnown RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 LSM12Q3MHD2 195 aaKnown RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 FOXR2Q6PJQ5 311 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 ZSCAN18Q8TBC5 510 aaPredicted RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 REXO4Q9GZR2 422 aaKnown RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 NMUR1Q9HB89 426 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 COL20A1Q9P218 1284 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 PDP2Q9P2J9 529 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 LRRC72A6NJI9 287 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 PCCBP05166 539 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 ITGAXP20702 1163 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 CORO7P57737 925 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 RPL38P63173 70 aaKnown RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 EXOC3L1Q86VI1 746 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 CCDC185Q8N715 623 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 EIF1ADQ8N9N8 165 aaKnown RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 ZNF398Q8TD17 642 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 SERHL2Q9H4I8 314 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 SERHLQ9NQF3 203 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 BMP6P22004 513 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 MANFP55145 182 aaKnown RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 UBXN2BQ14CS0 331 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 PLA2G4EQ3MJ16 856 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 SCIMPQ6UWF3 145 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 PEX5LQ8IYB4 626 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 CFAP206Q8IYR0 622 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 ADGRG2Q8IZP9 1017 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 KREMEN1Q96MU8 473 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 ABCG8Q9H221 673 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 TPRKBQ9Y3C4 175 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 ACTL7BQ9Y614 415 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 BMP7P18075 431 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 ATP12AP54707 1039 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 ZNF549Q6P9A3 640 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 TAF8Q7Z7C8 310 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 KREMEN2Q8NCW0 462 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 IRGQQ8WZA9 623 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 RIBC2Q9H4K1 309 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 MYL12BO14950 172 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 OLFML2BQ68BL8 750 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 TRIM40Q6P9F5 258 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 LINGO4Q6UY18 593 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 BTN2A1Q7KYR7 527 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 TMPRSS11BQ86T26 416 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 AHI1Q8N157 1196 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 SVOPQ8N4V2 548 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 CSPG4P5Q96PW8 444 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 PRRG4Q9BZD6 226 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 MMADHCQ9H3L0 296 aaPredicted RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 EVLQ9UI08 416 aaPredicted RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 STXBP5LQ9Y2K9 1186 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 HBS1LQ9Y450 684 aaKnown RBP13.48□□□□□ -0.25
TRAF3-208ENST00000560371 BTNL10A8MVZ5 291 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 FAM25AB3EWG3 89 aa13.48□□□□□ -0.25
TRAF3-208ENST00000560371 FAM25CB3EWG5 89 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms