RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 EFCAB7A8K855 629 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 BIN1O00499 593 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 CAPN5O15484 640 aaPredicted RBP16.66■□□□□ 0.26
HERC1-207ENST00000560316 BUB1BO60566 1050 aaPredicted RBP16.66■□□□□ 0.26
HERC1-207ENST00000560316 ECEL1O95672 775 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 PLEKP08567 350 aaPredicted RBP16.66■□□□□ 0.26
HERC1-207ENST00000560316 CCNB1P14635 433 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 NR1D1P20393 614 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 KELP23276 732 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 OAS2P29728 719 aaKnown RBP16.66■□□□□ 0.26
HERC1-207ENST00000560316 CSF2RBP32927 897 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 CSTF2P33240 577 aaKnown RBP eCLIP16.66■□□□□ 0.26
HERC1-207ENST00000560316 CD97P48960 835 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 MLLT10P55197 1068 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 TRA2AQ13595 282 aaKnown RBP eCLIP16.66■□□□□ 0.26
HERC1-207ENST00000560316 NR1D2Q14995 579 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 CYTH1Q15438 398 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 CLPPQ16740 277 aaPredicted RBP16.66■□□□□ 0.26
HERC1-207ENST00000560316 INO80DQ53TQ3 878 aaPredicted RBP16.66■□□□□ 0.26
HERC1-207ENST00000560316 TAF3Q5VWG9 929 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 ANKS6Q68DC2 871 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 PHLDB2Q86SQ0 1253 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 ATCAYQ86WG3 371 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 FAM129CQ86XR2 697 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 NRSN1Q8IZ57 195 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 PELI3Q8N2H9 469 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 OR4D9Q8NGE8 314 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 HCAR2Q8TDS4 363 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 APOBEC4Q8WW27 367 aaKnown RBP16.66■□□□□ 0.26
HERC1-207ENST00000560316 PATE1Q8WXA2 126 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 CASKIN2Q8WXE0 1202 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 METTL5Q9NRN9 209 aaKnown RBP16.66■□□□□ 0.26
HERC1-207ENST00000560316 PILRAQ9UKJ1 303 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 ATP8A1Q9Y2Q0 1164 aa16.66■□□□□ 0.26
HERC1-207ENST00000560316 LOC101059948A0A1B0GTJ6 334 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 GOLGA6L4A6NEF3 574 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 TEX33O43247 280 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 KRT7P08729 469 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 THRAP10827 490 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 AK4P27144 223 aaPredicted RBP16.65■□□□□ 0.26
HERC1-207ENST00000560316 KLRB1Q12918 225 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 RALGDSQ12967 914 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 BIRC2Q13490 618 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 CFAP58Q5T655 872 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 DCAF12Q5T6F0 453 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 ATP1A1-AS1Q5TC04 95 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 DNAAF5Q86Y56 855 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 CAMK1DQ8IU85 385 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 FAM71AQ8IYT1 594 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 CCDC185Q8N715 623 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 CPA5Q8WXQ8 436 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 TIGD1Q96MW7 591 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 ASPSCR1Q9BZE9 553 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 CARS2Q9HA77 564 aaKnown RBP16.65■□□□□ 0.26
HERC1-207ENST00000560316 TAAR2Q9P1P5 351 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 TP53TG5Q9Y2B4 290 aa16.65■□□□□ 0.26
HERC1-207ENST00000560316 K7EM74 188 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 PPM1DO15297 605 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 ZW10O43264 779 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 HOXC4P09017 264 aaPredicted RBP16.64■□□□□ 0.25
HERC1-207ENST00000560316 CYP11B1P15538 503 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 GM2AP17900 193 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 TRIM23P36406 574 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 STAT1P42224 750 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 UQCRFS1P47985 274 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 CCDC14Q49A88 953 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 BRAT1Q6PJG6 821 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 LIPIQ6XZB0 460 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 NLGN4XQ8N0W4 816 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 NLGN4YQ8NFZ3 816 aaPredicted RBP16.64■□□□□ 0.25
HERC1-207ENST00000560316 RXFP2Q8WXD0 754 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 KIAA1143Q96AT1 154 aaPredicted RBP16.64■□□□□ 0.25
HERC1-207ENST00000560316 CTRCQ99895 268 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 GSDMCQ9BYG8 508 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 WDR26Q9H7D7 661 aa16.64■□□□□ 0.25
HERC1-207ENST00000560316 TEP1Q99973 2627 aaKnown RBP16.63■□□□□ 0.25
HERC1-207ENST00000560316 IGHV1OR21-1A0A087WYE8 117 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 A8MX80 341 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 B4E171 279 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 RASA4BC9J798 803 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 RASA4O43374 803 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 FGFR1OPO95684 399 aaKnown RBP16.63■□□□□ 0.25
HERC1-207ENST00000560316 FUCA1P04066 466 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 ELFN1P0C7U0 828 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 TSPAN7P41732 249 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 GPR3P46089 330 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 BPIFB4P59827 614 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 ILF3Q12906 894 aaKnown RBP eCLIP16.63■□□□□ 0.25
HERC1-207ENST00000560316 TSR1Q2NL82 804 aaKnown RBP16.63■□□□□ 0.25
HERC1-207ENST00000560316 PNCKQ6P2M8 343 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 C16orf46Q6P387 395 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 SLC30A9Q6PML9 568 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 ARCQ7LC44 396 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 TIPARPQ7Z3E1 657 aaKnown RBP16.63■□□□□ 0.25
HERC1-207ENST00000560316 PYROXD2Q8N2H3 581 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 RTL3Q8N8U3 475 aaKnown RBP16.63■□□□□ 0.25
HERC1-207ENST00000560316 BMPERQ8N8U9 685 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 GPT2Q8TD30 523 aa16.63■□□□□ 0.25
HERC1-207ENST00000560316 PTCD2Q8WV60 388 aaKnown RBP16.63■□□□□ 0.25
HERC1-207ENST00000560316 RTP4Q96DX8 246 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms