RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 USP41Q3LFD5 358 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF789Q5FWF6 425 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 RALGPS1Q5JS13 557 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 HECTD3Q5T447 861 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 TPGS2Q68CL5 300 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ZFP1Q6P2D0 407 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 AFTPHQ6ULP2 937 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 RSPO2Q6UXX9 243 aaPredicted RBP8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF783Q6ZMS7 281 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 CHSY3Q70JA7 882 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 KDELC2Q7Z4H8 507 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 PTAR1Q7Z6K3 402 aaPredicted RBP8.11□□□□□ -1.11
SMAD3-212ENST00000559937 SNX32Q86XE0 403 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 TMEM126BQ8IUX1 230 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 PGAM4Q8N0Y7 254 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 PELI3Q8N2H9 469 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 KYQ8NBH2 561 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 FBXO22Q8NEZ5 403 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 OR6P1Q8NGX9 317 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 RHEBL1Q8TAI7 183 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 DTX3LQ8TDB6 740 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 FAM136AQ96C01 138 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 TRMT2BQ96GJ1 504 aaKnown RBP8.11□□□□□ -1.11
SMAD3-212ENST00000559937 CLPTM1LQ96KA5 538 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 MYRFLQ96LU7 910 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 LENG8Q96PV6 779 aaPredicted RBP8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF184Q99676 751 aaPredicted RBP8.11□□□□□ -1.11
SMAD3-212ENST00000559937 CCSER2Q9H7U1 834 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 MEAF6Q9HAF1 191 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ZBTB26Q9HCK0 441 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 MAN1C1Q9NR34 630 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 CATSPERZQ9NTU4 200 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 NLE1Q9NVX2 485 aaPredicted RBP8.11□□□□□ -1.11
SMAD3-212ENST00000559937 ZDHHC7Q9NXF8 308 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 GTSE1Q9NYZ3 720 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 AFF4Q9UHB7 1163 aaKnown RBP8.11□□□□□ -1.11
SMAD3-212ENST00000559937 TMCO1Q9UM00 188 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 POMPQ9Y244 141 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 SLC27A5Q9Y2P5 690 aa8.11□□□□□ -1.11
SMAD3-212ENST00000559937 A0A1B0GVM2 712 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 CCDC162PA2VCL2 907 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 TCAF2A6NFQ2 919 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 TBKBP1A7MCY6 615 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 H3BNC9 293 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 NEMP1O14524 444 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 CASQ2O14958 399 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 MUSKO15146 869 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 PFDN6O15212 129 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 CD3EAPO15446 510 aaKnown RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 PEX1O43933 1283 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 SOAT2O75908 522 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 SMNDC1O75940 238 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 GOT2P00505 430 aaKnown RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 SLC6A4P31645 630 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 PSMD8P48556 350 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 KCNQ1P51787 676 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF140P52738 457 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 STC1P52823 247 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 EPHB1P54762 984 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 SQLEQ14534 574 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 ANO7Q6IWH7 933 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 BNC2Q6ZN30 1099 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 RAB44Q7Z6P3 723 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 DHDDSQ86SQ9 333 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 CIR1Q86X95 450 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 OR4L1Q8NH43 312 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 GPR152Q8TDT2 470 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 GIPC2Q8TF65 315 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 DLG3Q92796 817 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 DNAJC1Q96KC8 554 aaKnown RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 TBATAQ96M53 351 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 CATSPER2Q96P56 530 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 NR1H4Q96RI1 486 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 NDNQ99608 321 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 C19orf43Q9BQ61 176 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 AARSD1Q9BTE6 412 aaKnown RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 CINPQ9BW66 212 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 NUF2Q9BZD4 464 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 GSTO2Q9H4Y5 243 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 TFB2MQ9H5Q4 396 aaKnown RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 WDR55Q9H6Y2 383 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 EFCAB1Q9HAE3 211 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 SYTL2Q9HCH5 934 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 TRPM5Q9NZQ8 1165 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 MARCH4Q9P2E8 410 aaPredicted RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 SARDHQ9UL12 918 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 MAFFQ9ULX9 164 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 TBC1D30Q9Y2I9 924 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 TRIM17Q9Y577 477 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 COPG1Q9Y678 874 aaKnown RBP8.1□□□□□ -1.11
SMAD3-212ENST00000559937 COMMD10Q9Y6G5 202 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 WASF2Q9Y6W5 498 aa8.1□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 LOC100653049A0A140TA62 436 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.09□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF840PA6NDX5 716 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 A6NHS1 94 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 H7C0S8 307 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 INSIG1O15503 277 aa8.09□□□□□ -1.11
SMAD3-212ENST00000559937 BUD23O43709 281 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms