RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 ANXA6P08133 673 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 KRT7P08729 469 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 HOXC4P09017 264 aaPredicted RBP17.06■□□□□ 0.32
LRRC28-210ENST00000558879 LHCGRP22888 699 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 VIPR1P32241 457 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 TRIM23P36406 574 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 SSR1P43307 286 aaKnown RBP17.06■□□□□ 0.32
LRRC28-210ENST00000558879 ADKP55263 362 aaKnown RBP17.06■□□□□ 0.32
LRRC28-210ENST00000558879 CBARPQ8N350 705 aaPredicted RBP17.06■□□□□ 0.32
LRRC28-210ENST00000558879 SDR16C5Q8N3Y7 309 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 PQLC3Q8N755 202 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 ATL2Q8NHH9 583 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 NSMCE1Q8WV22 266 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 TSACCQ96A04 125 aaPredicted RBP17.06■□□□□ 0.32
LRRC28-210ENST00000558879 FUBP1Q96AE4 644 aaKnown RBP17.06■□□□□ 0.32
LRRC28-210ENST00000558879 CHP1Q99653 195 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 DEF6Q9H4E7 631 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 KLQ9UEF7 1012 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 LHX6Q9UPM6 363 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 PCDHB1Q9Y5F3 818 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 DGKBQ9Y6T7 804 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 CACNA1GO43497 2377 aa17.06■□□□□ 0.32
LRRC28-210ENST00000558879 NPIPB15A6NHN6 443 aaPredicted RBP17.05■□□□□ 0.32
LRRC28-210ENST00000558879 ZNF487B1APH4 448 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 PSMD11O00231 422 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 ALPIP09923 528 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 TGM2P21980 687 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 SRP54P61011 504 aaKnown RBP17.05■□□□□ 0.32
LRRC28-210ENST00000558879 ELOCQ15369 112 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 NR0B2Q15466 257 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 PERM1Q5SV97 790 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 TIGD7Q6NT04 549 aaPredicted RBP17.05■□□□□ 0.32
LRRC28-210ENST00000558879 LVRNQ6Q4G3 990 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 ENPP7Q6UWV6 458 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 EFL1Q7Z2Z2 1120 aaKnown RBP17.05■□□□□ 0.32
LRRC28-210ENST00000558879 HID1Q8IV36 788 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 PAF1Q8N7H5 531 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 SNIP1Q8TAD8 396 aaKnown RBP17.05■□□□□ 0.32
LRRC28-210ENST00000558879 PDCD6IPQ8WUM4 868 aaKnown RBP17.05■□□□□ 0.32
LRRC28-210ENST00000558879 HDAC11Q96DB2 347 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 NUS1Q96E22 293 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 TSGA13Q96PP4 275 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 DEPDC7Q96QD5 511 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 RBM15Q96T37 977 aaKnown RBP eCLIP17.05■□□□□ 0.32
LRRC28-210ENST00000558879 POLR1EQ9GZS1 481 aaKnown RBP17.05■□□□□ 0.32
LRRC28-210ENST00000558879 FGF22Q9HCT0 170 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 NT5MQ9NPB1 228 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 AMACRQ9UHK6 382 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 PHTF1Q9UMS5 762 aa17.05■□□□□ 0.32
LRRC28-210ENST00000558879 ZNF106Q9H2Y7 1883 aaKnown RBP17.05■□□□□ 0.32
LRRC28-210ENST00000558879 TMEM202A6NGA9 273 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 AKR1B10O60218 316 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 MAP3K6O95382 1288 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 CCNCP24863 283 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 GBE1Q04446 702 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 IHHQ14623 411 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 IFI16Q16666 785 aaKnown RBP17.04■□□□□ 0.32
LRRC28-210ENST00000558879 PNCKQ6P2M8 343 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 VSIG1Q86XK7 387 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 MAP7D3Q8IWC1 876 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 ARL10Q8N8L6 244 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 KCTD6Q8NC69 237 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 OR56A4Q8NGH8 313 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 SLC35G2Q8TBE7 412 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 MAPK15Q8TD08 544 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 PIH1D2Q8WWB5 315 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 OR1E3Q8WZA6 343 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 GLMNQ92990 594 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 NAT6Q93015 286 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 DTD2Q96FN9 168 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 SCRN2Q96FV2 425 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 SEMA3CQ99985 751 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 NHEJ1Q9H9Q4 299 aaPredicted RBP17.04■□□□□ 0.32
LRRC28-210ENST00000558879 SPTLC3Q9NUV7 552 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 ZNHIT6Q9NWK9 470 aaKnown RBP17.04■□□□□ 0.32
LRRC28-210ENST00000558879 KCTD5Q9NXV2 234 aa17.04■□□□□ 0.32
LRRC28-210ENST00000558879 A8MX80 341 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 CACNB4O00305 520 aaPredicted RBP17.03■□□□□ 0.32
LRRC28-210ENST00000558879 TNFRSF10CO14798 259 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 MATN3O15232 486 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 BRINP1O60477 761 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 CSO75390 466 aaKnown RBP17.03■□□□□ 0.32
LRRC28-210ENST00000558879 PDHA1P08559 390 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 TPM1P09493 284 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 CYP2A6P11509 494 aaPredicted RBP17.03■□□□□ 0.32
LRRC28-210ENST00000558879 MYCLP1P12525 358 aaPredicted RBP17.03■□□□□ 0.32
LRRC28-210ENST00000558879 KDELR1P24390 212 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 NFKBIAP25963 317 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 TEAD1P28347 426 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 RPIAP49247 311 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 SLC10A2Q12908 348 aaPredicted RBP17.03■□□□□ 0.32
LRRC28-210ENST00000558879 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
LRRC28-210ENST00000558879 ACOX1Q15067 660 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 COL28A1Q2UY09 1125 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 ARMC12Q5T9G4 340 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 HSD11B1LQ7Z5J1 315 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 RHOT2Q8IXI1 618 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 PLD5Q8N7P1 536 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 KYQ8NBH2 561 aa17.03■□□□□ 0.32
LRRC28-210ENST00000558879 RNF214Q8ND24 703 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms