RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 SP5Q6BEB4 398 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 GDPD4Q6W3E5 623 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 ARHGAP22Q7Z5H3 698 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 TMEM110Q86TL2 294 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 MMP21Q8N119 569 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 RBMXL3Q8N7X1 1067 aaKnown RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 ARHGEF2Q92974 986 aaKnown RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 SNRNP40Q96DI7 357 aaKnown RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 PAGE5Q96GU1 130 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 TRIM62Q9BVG3 475 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 TRIT1Q9H3H1 467 aaKnown RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 CARS2Q9HA77 564 aaKnown RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 PCDH12Q9NPG4 1184 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 SLAMF7Q9NQ25 335 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 FBXO8Q9NRD0 319 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 PDP2Q9P2J9 529 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 KLHL3Q9UH77 587 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 MTMR6Q9Y217 621 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 PLEKHM1Q9Y4G2 1056 aa11.9□□□□□ -0.5
SMAD3-206ENST00000558739 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.9□□□□□ -0.5
SMAD3-206ENST00000558739 IGLV3-10A0A075B6K4 115 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 ANKUB1A6NFN9 424 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 CACNB4O00305 520 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-206ENST00000558739 CUTAO60888 179 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 SRGAP2O75044 1071 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 CREG1O75629 220 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 GSRP00390 522 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 HOXB4P17483 251 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-206ENST00000558739 GM2AP17900 193 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 MMP12P39900 470 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 ACADSBP45954 432 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 PPM1FP49593 454 aaPredicted RBP11.89□□□□□ -0.51
SMAD3-206ENST00000558739 CCL11P51671 97 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 BIRC2Q13490 618 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 SQSTM1Q13501 440 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 IL10RAQ13651 578 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 STILQ15468 1287 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 RRAGAQ7L523 313 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 ZSWIM9Q86XI8 627 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 PPM1KQ8N3J5 372 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 ATL2Q8NHH9 583 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 ISG20Q96AZ6 181 aaKnown RBP11.89□□□□□ -0.51
SMAD3-206ENST00000558739 CPXM1Q96SM3 734 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 OSBPL1AQ9BXW6 950 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 ARHGEF38Q9NXL2 777 aa11.89□□□□□ -0.51
SMAD3-206ENST00000558739 SIDT1Q9NXL6 827 aaKnown RBP11.89□□□□□ -0.51
SMAD3-206ENST00000558739 ARGFXA6NJG6 315 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 PRSS44E7EML9 344 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 ZG16O60844 167 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 PPP6R2O75170 966 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 TBXAS1P24557 533 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-206ENST00000558739 NFKBIAP25963 317 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 SLC20A2Q08357 652 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 MAP7Q14244 749 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 PAPD7Q5XG87 772 aaKnown RBP11.88□□□□□ -0.51
SMAD3-206ENST00000558739 C6orf15Q6UXA7 325 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-206ENST00000558739 ZNF517Q6ZMY9 492 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-206ENST00000558739 FAM183BPQ6ZVS7 135 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 ARHGEF19Q8IW93 802 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 PLPP6Q8IY26 295 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 CT55Q8WUE5 264 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 HMCESQ96FZ2 354 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 EXOC2Q96KP1 924 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 MED15Q96RN5 788 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 ACTL8Q9H568 366 aa11.88□□□□□ -0.51
SMAD3-206ENST00000558739 PCDHGA9Q9Y5G4 932 aaKnown RBP11.88□□□□□ -0.51
SMAD3-206ENST00000558739 TRBV23OR9-2A0A075B6M9 112 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 FAM170AA1A519 330 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 ZSCAN5CA6NGD5 496 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-206ENST00000558739 POLR1CO15160 346 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-206ENST00000558739 HSF2BPO75031 334 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 RECQL5O94762 991 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-206ENST00000558739 TMCC1O94876 653 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 POP4O95707 220 aaKnown RBP11.87□□□□□ -0.51
SMAD3-206ENST00000558739 EML2O95834 649 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 SNRPB2P08579 225 aaKnown RBP11.87□□□□□ -0.51
SMAD3-206ENST00000558739 CASP14P31944 242 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 GNPDA1P46926 289 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 CXCR3P49682 368 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 SNRPD1P62314 119 aaKnown RBP11.87□□□□□ -0.51
SMAD3-206ENST00000558739 SH3BP2P78314 561 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 CTBSQ01459 385 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 CDK18Q07002 472 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 FOXM1Q08050 763 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 DNASE1L3Q13609 305 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 RESP18Q5W5W9 173 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 OLFML1Q6UWY5 402 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 SLC47A2Q86VL8 602 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 SMYD4Q8IYR2 804 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-206ENST00000558739 CISD2Q8N5K1 135 aaKnown RBP11.87□□□□□ -0.51
SMAD3-206ENST00000558739 STK32AQ8WU08 396 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 SLC35C1Q96A29 364 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 ELMO2Q96JJ3 720 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 KREMEN1Q96MU8 473 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 ZPBPQ9BS86 351 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 NUDT9Q9BW91 350 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 WDR26Q9H7D7 661 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 NTNG1Q9Y2I2 539 aa11.87□□□□□ -0.51
SMAD3-206ENST00000558739 AKAP6Q13023 2319 aa11.86□□□□□ -0.51
SMAD3-206ENST00000558739 CSPG4Q6UVK1 2322 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms