RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-208	ENST00000558602	GGA2	Q9UJY4	613 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	FBXO5	Q9UKT4	447 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	G3BP2	Q9UN86	482 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	SZT2	Q5T011	3432 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	PKD1L2	Q7Z442	2459 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602		A0A096LPK6	155 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	TRAV19	A0A0A6YYK7	116 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	CCDC195	A0A1B0GUA6	201 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	HEATR9	A2RTY3	570 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	HGS	O14964	777 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	TRIM24	O15164	1050 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	PHGDH	O43175	533 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	PLIN3	O60664	434 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	DNAJC6	O75061	913 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	SIN3B	O75182	1162 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	ZNF821	O75541	412 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	NDST3	O95803	873 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	EPO	P01588	193 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	PROC	P04070	461 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	BPGM	P07738	259 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	SBK3	P0C264	359 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	PTPN2	P17706	415 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	CDC25C	P30307	473 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	ARRB2	P32121	409 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	GK	P32189	559 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	AVPR1A	P37288	418 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	CTSO	P43234	321 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	CSE1L	P55060	971 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	BST1	Q10588	318 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	LMAN2	Q12907	356 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	DLG1	Q12959	904 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	SEMA3A	Q14563	771 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	PCLAF	Q15004	111 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	SEPT7	Q16181	437 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	HSF5	Q4G112	596 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	PRSS36	Q5K4E3	855 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	RBM20	Q5T481	1227 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	FYB2	Q5VWT5	728 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	RNF43	Q68DV7	783 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	ZNF470	Q6ECI4	717 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	NEPRO	Q6NW34	567 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	SPATS2	Q86XZ4	545 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	TMEM25	Q86YD3	366 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	SLC41A1	Q8IVJ1	513 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	MFN1	Q8IWA4	741 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	ELMOD1	Q8N336	334 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	CPXM2	Q8N436	756 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	C12orf76	Q8N812	135 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	HJURP	Q8NCD3	748 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	C2CD4A	Q8NCU7	369 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	OR6K2	Q8NGY2	324 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	RFWD2	Q8NHY2	731 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	ACMSD	Q8TDX5	336 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	MYLIP	Q8WY64	445 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	ZNF707	Q96C28	371 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	DNAJC1	Q96KC8	554 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	LMLN	Q96KR4	655 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	LRRC3B	Q96PB8	259 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	PPP1R2P1	Q96PQ5	205 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	GPR22	Q99680	433 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	DDX50	Q9BQ39	737 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	TDRD1	Q9BXT4	1180 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	NSRP1	Q9H0G5	558 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	RHOJ	Q9H4E5	214 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	SIRPG	Q9P1W8	387 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	TXNDC16	Q9P2K2	825 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	TSR3	Q9UJK0	312 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	DCTN4	Q9UJW0	460 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	VPS28	Q9UK41	221 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	SLC39A10	Q9ULF5	831 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	YBX2	Q9Y2T7	364 aa	Known RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	STARD13	Q9Y3M8	1113 aa		4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	USP15	Q9Y4E8	981 aa	Predicted RBP	4.92	□□□□□ -1.62
IDH3A-208	ENST00000558602	CCT8L1P	A6NM43	557 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602		H0YHG0	523 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	AXIN1	O15169	862 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	ITM2A	O43736	263 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	GLRA3	O75311	464 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	FGF1	P05230	155 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	SLC35E2B	P0CK96	405 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	FGF3	P11487	239 aa	Predicted RBP	4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	HLA-DPA1	P20036	260 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	SAT1	P21673	171 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	HLA-F	P30511	346 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	ALDH3A1	P30838	453 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	STK19	P49842	368 aa	Predicted RBP	4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	MNAT1	P51948	309 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	TAS2R39	P59534	338 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	ACVR1	Q04771	509 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	CDH18	Q13634	790 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	ITIH4	Q14624	930 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	RFTN1	Q14699	578 aa	Predicted RBP	4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	CHI3L2	Q15782	390 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	OCLN	Q16625	522 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	MPPE1	Q53F39	396 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	DGKK	Q5KSL6	1271 aa		4.91	□□□□□ -1.62
IDH3A-208	ENST00000558602	NCEH1	Q6PIU2	408 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms