RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 H3BM21 787 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 APOC4-APOC2K7ER74 178 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 KCNK1O00180 336 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 RAD51BO15315 384 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 SPINT1O43278 529 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 TNFSF14O43557 240 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 FZD6O60353 706 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 RECQL5O94762 991 aaPredicted RBP8.51□□□□□ -1.05
TPM1-213ENST00000558400 MAP3K6O95382 1288 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 CPP00450 1065 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 APOC2P02655 101 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 CSF2P04141 144 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 HOXC4P09017 264 aaPredicted RBP8.51□□□□□ -1.05
TPM1-213ENST00000558400 C1SP09871 688 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 C6P13671 934 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 ZNF30P17039 623 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 ITIH2P19823 946 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 EPHA8P29322 1005 aaPredicted RBP8.51□□□□□ -1.05
TPM1-213ENST00000558400 VIPR1P32241 457 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 PTPN7P35236 360 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 TNNT3P45378 269 aaPredicted RBP8.51□□□□□ -1.05
TPM1-213ENST00000558400 DYNLT1P63172 113 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 MTM1Q13496 603 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 ACOX1Q15067 660 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 SLC14A2Q15849 920 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 WSCD2Q2TBF2 565 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 LRRC73Q5JTD7 316 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 ZNF662Q6ZS27 426 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 BBS12Q6ZW61 710 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 NLRP8Q86W28 1048 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 PARGQ86W56 976 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 ZSWIM9Q86XI8 627 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 CBARPQ8N350 705 aaPredicted RBP8.51□□□□□ -1.05
TPM1-213ENST00000558400 SDR16C5Q8N3Y7 309 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 LRRC57Q8N9N7 239 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 TTC13Q8NBP0 860 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 ARRDC2Q8TBH0 407 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 PIH1D2Q8WWB5 315 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 ANP32BQ92688 251 aaKnown RBP8.51□□□□□ -1.05
TPM1-213ENST00000558400 HAUS1Q96CS2 278 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 TEKT5Q96M29 485 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 TBATAQ96M53 351 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 MYOCQ99972 504 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 DUSP23Q9BVJ7 150 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 OSBPL8Q9BZF1 889 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 SLC25A51Q9H1U9 297 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 GOLPH3Q9H4A6 298 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 GPR27Q9NS67 375 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 EVA1BQ9NVM1 165 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 TRHDEQ9UKU6 1024 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 CA5BQ9Y2D0 317 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 TTLL3Q9Y4R7 772 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 ADGRG1Q9Y653 693 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 CSNK1G3Q9Y6M4 447 aa8.51□□□□□ -1.05
TPM1-213ENST00000558400 MAST4O15021 2626 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 PCDH15Q96QU1 1955 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 A0A0J9YYE9 177 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 TTC24A2A3L6 582 aaPredicted RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 GRID2IPA4D2P6 1211 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 RGSL1A5PLK6 1076 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 ANKRD66B4E2M5 251 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 TAF4O00268 1085 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 GIPC1O14908 333 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 HEXIM1O94992 359 aaKnown RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 LDOC1O95751 146 aaPredicted RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 EPOP01588 193 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 TRBC1P01850 177 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 HLA-DQB2P05538 268 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 PTMAP06454 111 aaKnown RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 PYGLP06737 847 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 CCDC175P0C221 793 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 ALPPL2P10696 532 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 KELP23276 732 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 DGKAP23743 735 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 TRIM23P36406 574 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 DSC2Q02487 901 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 TRAF2Q12933 501 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 RALGDSQ12967 914 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 BNIP3Q12983 259 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 ZNF211Q13398 564 aaPredicted RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 PDE1CQ14123 709 aaPredicted RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 FZD2Q14332 565 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 INPP5AQ14642 412 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 SHBQ15464 509 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 NPNTQ6UXI9 565 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 PID1Q7Z2X4 250 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 NRSN1Q8IZ57 195 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 CNTD1Q8N815 330 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 TP53I13Q8NBR0 393 aaPredicted RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 CCHCR1Q8TD31 782 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 HTR3CQ8WXA8 447 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 KRT35Q92764 455 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 IMP4Q96G21 291 aaKnown RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 NSMCE3Q96MG7 304 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 CAMK1GQ96NX5 476 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 AGAP3Q96P47 875 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 MCCC1Q96RQ3 725 aaPredicted RBP8.5□□□□□ -1.05
TPM1-213ENST00000558400 LYSMD1Q96S90 227 aa8.5□□□□□ -1.05
TPM1-213ENST00000558400 DESI2Q9BSY9 194 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms