RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 FAM84AQ96KN4 292 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 UROC1Q96N76 676 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 PTCHD1Q96NR3 888 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 PPP1R2P1Q96PQ5 205 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 TMEM121Q9BTD3 319 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 TUBB6Q9BUF5 446 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 DUSP16Q9BY84 665 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 UPF3AQ9H1J1 476 aaKnown RBP7.32□□□□□ -1.24
MARK3-212ENST00000558223 EPB41L1Q9H4G0 881 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 GSX1Q9H4S2 264 aaPredicted RBP7.32□□□□□ -1.24
MARK3-212ENST00000558223 ACSS3Q9H6R3 686 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 VPS37BQ9H9H4 285 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 LRRC4Q9HBW1 653 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 XAB2Q9HCS7 855 aaKnown RBP7.32□□□□□ -1.24
MARK3-212ENST00000558223 SEPSECSQ9HD40 501 aaKnown RBP7.32□□□□□ -1.24
MARK3-212ENST00000558223 KCNK9Q9NPC2 374 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 CNGB3Q9NQW8 809 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.32□□□□□ -1.24
MARK3-212ENST00000558223 FAM105AQ9NUU6 356 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 EURLQ9NYK6 297 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 DONSONQ9NYP3 566 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 PCSK1NQ9UHG2 260 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 CDH9Q9ULB4 789 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 COA3Q9Y2R0 106 aaPredicted RBP7.32□□□□□ -1.24
MARK3-212ENST00000558223 PCDHB1Q9Y5F3 818 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 DOCK5Q9H7D0 1870 aa7.32□□□□□ -1.24
MARK3-212ENST00000558223 ZSWIM8A7E2V4 1837 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 ZNFX1Q9P2E3 1918 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 CFAP73A6NFT4 308 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 LRRC14BA6NHZ5 514 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 CCT8L1PA6NM43 557 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 H0YHG0 523 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 PIP5K1BO14986 540 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 PSMD3O43242 534 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 PAPSS1O43252 624 aaPredicted RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 HNRNPCL1O60812 293 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 DAB1O75553 588 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 DGKIO75912 1065 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 HSPA4LO95757 839 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 ANXA2P07355 339 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 TPSB2P20231 275 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 ALDH3A1P30838 453 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 GJA4P35212 333 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 MSH2P43246 934 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 SERPINB9P50453 376 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 SEC24CP53992 1094 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 POLE2P56282 527 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 LILRA4P59901 499 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 YWHAZP63104 245 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 ZNF33AQ06730 810 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 ILF2Q12905 390 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 MTA1Q13330 715 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 PDK1Q15118 436 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 TPSAB1Q15661 275 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 TSTQ16762 297 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 SKIDA1Q1XH10 827 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 C3orf38Q5JPI3 329 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 CATSPEREQ5SY80 951 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 UBXN11Q5T124 520 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 TMEM63BQ5T3F8 832 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 TWF2Q6IBS0 349 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 SCYL2Q6P3W7 929 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 BORAQ6PGQ7 559 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 C20orf204Q6ZNR8 217 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 C3orf62Q6ZUJ4 267 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 GALNTL5Q7Z4T8 443 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 MRPL10Q7Z7H8 261 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 TRABD2AQ86V40 505 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 RASAL3Q86YV0 1011 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 CCDC117Q8IWD4 279 aaPredicted RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 ADGRG2Q8IZP9 1017 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 VPS52Q8N1B4 723 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 Q8N3U1 123 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 EMC1Q8N766 993 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 PCSK9Q8NBP7 692 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 B3GALNT2Q8NCR0 500 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 SMG8Q8ND04 991 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 PIP4K2CQ8TBX8 421 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 ZNF398Q8TD17 642 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 CPT1BQ92523 772 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 NTAN1Q96AB6 310 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 PGAP3Q96FM1 320 aaPredicted RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 HIC2Q96JB3 615 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 C9orf72Q96LT7 481 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 COG8Q96MW5 612 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 YME1L1Q96TA2 773 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 MRPL45Q9BRJ2 306 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 C11orf84Q9BUA3 381 aaPredicted RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 RNF208Q9H0X6 261 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 LRRC4CQ9HCJ2 640 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 PCDH18Q9HCL0 1135 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 EIF2B3Q9NR50 452 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 ABCF3Q9NUQ8 709 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 PIH1D1Q9NWS0 290 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 KLHL14Q9P2G3 628 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 XPO7Q9UIA9 1087 aaKnown RBP7.31□□□□□ -1.24
MARK3-212ENST00000558223 TMPRSS11EQ9UL52 423 aa7.31□□□□□ -1.24
MARK3-212ENST00000558223 GINS2Q9Y248 185 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms