RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 NIPBLQ6KC79 2804 aaeCLIP14.38□□□□□ -0.11
TRAPPC6B-207ENST00000557764 IGLV3-10A0A075B6K4 115 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 A6NCN8 305 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 POLR1CO15160 346 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ACTN4O43707 911 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 HSF2BPO75031 334 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 SRGAP2O75044 1071 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 RHOBTB3O94955 611 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 CBX6O95503 412 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 VARSP26640 1264 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ACVRL1P37023 503 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 LIG3P49916 1009 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 DNM1Q05193 864 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ELP6Q0PNE2 266 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 TSR1Q2NL82 804 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ZCWPW2Q504Y3 356 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ZRANB3Q5FWF4 1079 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 EFHC1Q5JVL4 640 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 SP5Q6BEB4 398 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 LEKR1Q6ZMV7 388 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 DRC7Q8IY82 874 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ARHGEF2Q92974 986 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 C19orf60Q96EN9 201 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 HMCESQ96FZ2 354 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 NT5C1BQ96P26 610 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 GSDMCQ9BYG8 508 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 CARS2Q9HA77 564 aaKnown RBP14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ASNSD1Q9NWL6 643 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ZNF212Q9UDV6 495 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 MTMR6Q9Y217 621 aa14.37□□□□□ -0.11
TRAPPC6B-207ENST00000557764 PRSS38A1L453 326 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 CETN3O15182 167 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 KRT86O43790 486 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 LRCH4O75427 683 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 CREG1O75629 220 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 YEATS4O95619 227 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 AK4P27144 223 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 STAT1P42224 750 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 GPLD1P80108 840 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 PDCLQ13371 301 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 AGERQ15109 404 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 BRMS1LQ5PSV4 323 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ARTNQ5T4W7 220 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 OTUD1Q5VV17 481 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 RESP18Q5W5W9 173 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 SLC30A9Q6PML9 568 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 C6orf15Q6UXA7 325 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ARHGAP22Q7Z5H3 698 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 NAGSQ8N159 534 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 GUF1Q8N442 669 aaKnown RBP14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 AHCYL2Q96HN2 611 aaKnown RBP14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 C1orf74Q96LT6 269 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 LGR4Q9BXB1 951 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ULBP3Q9BZM4 244 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 MLXIPLQ9NP71 852 aa14.36□□□□□ -0.11
TRAPPC6B-207ENST00000557764 HOXC4P09017 264 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ZNF28P17035 718 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 CXCR3P49682 368 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 CCL11P51671 97 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 SUOXP51687 545 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 GEMIN4P57678 1058 aaKnown RBP14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 RAD51Q06609 339 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ILF3Q12906 894 aaKnown RBP eCLIP14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 CHAF1BQ13112 559 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 RAPGEF1Q13905 1077 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 CPZQ66K79 652 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 RRAGAQ7L523 313 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 LYSMD3Q7Z3D4 306 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ZNF761Q86XN6 746 aaPredicted RBP14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 GALNT6Q8NCL4 622 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ZYG11BQ9C0D3 744 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 METTL14Q9HCE5 456 aaKnown RBP14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 PCDH12Q9NPG4 1184 aa14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 PCDHGA9Q9Y5G4 932 aaKnown RBP14.35□□□□□ -0.11
TRAPPC6B-207ENST00000557764 CXorf51AA0A1B0GTR3 108 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 SNPHO15079 494 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 MED7O43513 233 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 DIAPH2O60879 1101 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 TFE3P19532 575 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 PAPD7Q5XG87 772 aaKnown RBP14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 SLC47A2Q86VL8 602 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 OR10G6Q8NH81 332 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 GDAP1L1Q96MZ0 367 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ZNF396Q96N95 335 aaPredicted RBP14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 TTYH3Q9C0H2 523 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 RUBCNLQ9H714 662 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 PCDHA7Q9UN72 937 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 ZNF451Q9Y4E5 1061 aa14.34□□□□□ -0.11
TRAPPC6B-207ENST00000557764 A0A1B0GTL3 188 aa14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 ANKUB1A6NFN9 424 aa14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 INSIG1O15503 277 aa14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 TEX33O43247 280 aa14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 DPM1O60762 260 aa14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 DAB1O75553 588 aa14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 LETM1O95202 739 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 RECKO95980 971 aa14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 FUCA1P04066 466 aa14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 CASP14P31944 242 aa14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 TRIM23P36406 574 aa14.33□□□□□ -0.12
TRAPPC6B-207ENST00000557764 CUL4AQ13619 759 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms