RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 SPRY4Q9C004 299 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 SLC25A18Q9H1K4 315 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 PLAC1Q9HBJ0 212 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 MKKSQ9NPJ1 570 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 TRPV5Q9NQA5 729 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 RRAGDQ9NQL2 400 aaPredicted RBP1.77□□□□□ -2.13
HIF1A-212ENST00000557538 BABAM1Q9NWV8 329 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 PSD3Q9NYI0 1048 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 PTGFRNQ9P2B2 879 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 SLC8A2Q9UPR5 921 aa1.77□□□□□ -2.13
HIF1A-212ENST00000557538 IGLV5-39A0A0G2JS06 123 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TCRBV21S2A2A0A5A6 115 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CPED1A4D0V7 1026 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM110-MUSTN1A8MSY1 372 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 BOLA2-SMG1P6H3BVE0 249 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 VILLO15195 856 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CTAGE5O15320 804 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 LCATP04180 440 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF182P17025 639 aaPredicted RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 GABRB1P18505 474 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 AMTP48728 403 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 METAP2P50579 478 aaKnown RBP eCLIP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SRSF4Q08170 494 aaKnown RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM115Q12893 351 aaPredicted RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 KCTD2Q14681 263 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 METTL2BQ6P1Q9 378 aaKnown RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SLC22A25Q6T423 547 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SEPT14Q6ZU15 432 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 ARHGEF26Q96DR7 871 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 METTL2AQ96IZ6 378 aaKnown RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TIGD1Q96MW7 591 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 NEUROD6Q96NK8 337 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SLC22A12Q96S37 553 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 MXRA8Q9BRK3 442 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 LZTS2Q9BRK4 669 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 ISCUQ9H1K1 167 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 ESRP2Q9H6T0 727 aaKnown RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 DONSONQ9NYP3 566 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 PLK2Q9NYY3 685 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 COPG2Q9UBF2 871 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SRPRBQ9Y5M8 271 aaKnown RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CEPT1Q9Y6K0 416 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 A6NCN8 305 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 PRSS47A8MTI9 375 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 C19orf81C9J6K1 198 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 PPEF2O14830 753 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SEC14L5O43304 696 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TMCC2O75069 709 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 NDUFS3O75489 264 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 NFATC1O95644 943 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CCDC172P0C7W6 258 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 HOXB2P14652 356 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SLC2A4P14672 509 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CIITAP33076 1130 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 RAD52P43351 418 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CDH12P55289 794 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CXCL9Q07325 125 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 GRIK2Q13002 908 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 FGFBP1Q14512 234 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CCDC6Q16204 474 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SUPT20HL1Q3ZLR7 823 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CXorf66Q5JRM2 361 aaPredicted RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 EPHA10Q5JZY3 1008 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 ITPRIPL1Q6GPH6 555 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF425Q6IV72 752 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TECPR1Q7Z6L1 1165 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 ADGRF4Q8IZF3 695 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SLC38A9Q8NBW4 561 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 PRSS3P2Q8NHM4 247 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SCFD2Q8WU76 684 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM174Q8WUU8 243 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 MYCBPQ99417 103 aaPredicted RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 PIP5K1AQ99755 562 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 VPS33BQ9H267 617 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 KRCC1Q9NPI7 259 aaPredicted RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 DDX4Q9NQI0 724 aaKnown RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM184CQ9NVA4 438 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 MCM9Q9NXL9 1143 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 LIMA1Q9UHB6 759 aaKnown RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 NENFQ9UMX5 172 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 SOCS2O14508 198 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 PLOD3O60568 738 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 JRKO75564 520 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TPPPO94811 219 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 IPO7O95373 1038 aaKnown RBP1.76□□□□□ -2.13
HIF1A-212ENST00000557538 FTCDO95954 541 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 NEFHP12036 1026 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 TMEM11P17152 192 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 YY1P25490 414 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 CHMLP26374 656 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 MAGEA8P43361 318 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 RGS19P49795 217 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 PNLIPRP2P54317 469 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 PCLAFQ15004 111 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 ALG11Q2TAA5 492 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 HSP90B2PQ58FF3 399 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 MTX3Q5HYI7 312 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 DCAF12L2Q5VW00 463 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 KLHL35Q6PF15 583 aa1.76□□□□□ -2.13
HIF1A-212ENST00000557538 LINGO4Q6UY18 593 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms