RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 NPNTQ6UXI9 565 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 KYAT3Q6YP21 454 aaKnown RBP8.37□□□□□ -1.07
PSEN1-223ENST00000557511 BBS12Q6ZW61 710 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 DPPA4Q7L190 304 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 TRIM46Q7Z4K8 759 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 NT5DC3Q86UY8 548 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 ZC3H18Q86VM9 953 aaKnown RBP8.37□□□□□ -1.07
PSEN1-223ENST00000557511 CDKL3Q8IVW4 592 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-223ENST00000557511 C1orf216Q8TAB5 229 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 CCHCR1Q8TD31 782 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 RHBDD1Q8TEB9 315 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 KRT35Q92764 455 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 ECHDC3Q96DC8 303 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 VAT1Q99536 393 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 IL12RB2Q99665 862 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 ERVMER34-1Q9H9K5 563 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 EBF2Q9HAK2 575 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 FZD3Q9NPG1 666 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 LZTFL1Q9NQ48 299 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 KLHL8Q9P2G9 620 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-223ENST00000557511 SALL4Q9UJQ4 1053 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 RPL26L1Q9UNX3 145 aaKnown RBP8.37□□□□□ -1.07
PSEN1-223ENST00000557511 ZFR2Q9UPR6 939 aaKnown RBP8.37□□□□□ -1.07
PSEN1-223ENST00000557511 ITM2BQ9Y287 266 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 PCDHGB2Q9Y5G2 931 aa8.37□□□□□ -1.07
PSEN1-223ENST00000557511 SDK1Q7Z5N4 2213 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 A0A1W2PR77 199 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 GOLGA6CA6NDK9 693 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 GOLGA6BA6NDN3 693 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 NEMP2A6NFY4 417 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 H0Y8X5 98 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 RNF103O00237 685 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 CACNB4O00305 520 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-223ENST00000557511 PDE2AO00408 941 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-223ENST00000557511 MUSKO15146 869 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 PGLSO95336 258 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 HLA-DQB2P05538 268 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 GOLGA6DP0CG33 693 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 ALPPL2P10696 532 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 BMP2P12643 396 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 CEACAM1P13688 526 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 CR2P20023 1033 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 KELP23276 732 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 PTPN7P35236 360 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 MMP12P39900 470 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 CD86P42081 329 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 GRK6P43250 576 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 MARCKSL1P49006 195 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 CLDN2P57739 230 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 YPEL5P62699 121 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 DSC2Q02487 901 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 SLC10A2Q12908 348 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-223ENST00000557511 PDE1CQ14123 709 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-223ENST00000557511 RPS6KA1Q15418 735 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 TAZQ16635 292 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 ZNF423Q2M1K9 1284 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 TEX44Q53QW1 395 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 DENND2CQ68D51 928 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 ITPRIPL1Q6GPH6 555 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 PSAPL1Q6NUJ1 521 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 DARS2Q6PI48 645 aaKnown RBP8.36□□□□□ -1.07
PSEN1-223ENST00000557511 Q6ZSR6 202 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 PID1Q7Z2X4 250 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 ABI3BPQ7Z7G0 1075 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 NAXDQ8IW45 347 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 PGBD5Q8N414 524 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 LRRC57Q8N9N7 239 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 TMEM145Q8NBT3 493 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 LPCAT1Q8NF37 534 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 TRIM58Q8NG06 486 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 OR2I1PQ8NGU4 316 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 BTN2A2Q8WVV5 523 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 HTR3CQ8WXA8 447 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 SCRN2Q96FV2 425 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 AGAP3Q96P47 875 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 PPP1R2P1Q96PQ5 205 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 SRPK1Q96SB4 655 aaKnown RBP8.36□□□□□ -1.07
PSEN1-223ENST00000557511 CDC6Q99741 560 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 ORAI3Q9BRQ5 295 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 PCDH9Q9HC56 1237 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 GOLGA6AQ9NYA3 693 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 B4GALT6Q9UBX8 382 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 TRIM10Q9UDY6 481 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 TRHDEQ9UKU6 1024 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 RALGAPA1Q6GYQ0 2036 aa8.36□□□□□ -1.07
PSEN1-223ENST00000557511 A0A1B0GTQ1 180 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 A8MX80 341 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 ERVH48-1M5A8F1 160 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 PSMD11O00231 422 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 TRAFD1O14545 582 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-223ENST00000557511 KCNK3O14649 394 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 WNT9AO14904 365 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 SH3BP5O60239 455 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 PCDHGA12O60330 932 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 RECQL5O94762 991 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-223ENST00000557511 KCNK5O95279 499 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 WNT1P04628 370 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 PRKCGP05129 697 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 PCCBP05166 539 aa8.35□□□□□ -1.07
PSEN1-223ENST00000557511 PYGLP06737 847 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms