RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 OGFRQ9NZT2 677 aa3.25□□□□□ -1.89
HMGB1P14-201ENST00000557424 NLKQ9UBE8 527 aa3.25□□□□□ -1.89
HMGB1P14-201ENST00000557424 CACNG4Q9UBN1 327 aa3.25□□□□□ -1.89
HMGB1P14-201ENST00000557424 UPB1Q9UBR1 384 aa3.25□□□□□ -1.89
HMGB1P14-201ENST00000557424 UBA2Q9UBT2 640 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P14-201ENST00000557424 CPSF3Q9UKF6 684 aaKnown RBP3.25□□□□□ -1.89
HMGB1P14-201ENST00000557424 PLAGL1Q9UM63 463 aa3.25□□□□□ -1.89
HMGB1P14-201ENST00000557424 PPIEQ9UNP9 301 aaKnown RBP3.25□□□□□ -1.89
HMGB1P14-201ENST00000557424 B3GNT3Q9Y2A9 372 aa3.25□□□□□ -1.89
HMGB1P14-201ENST00000557424 COX11Q9Y6N1 276 aa3.25□□□□□ -1.89
HMGB1P14-201ENST00000557424 SPATA31A1Q5TZJ5 1347 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 ZNF335Q9H4Z2 1342 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 LINC01548A6NM66 108 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 ENO4A6NNW6 628 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 EIF3CLB5ME19 914 aaKnown RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 K7EPI3 171 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 PLOD2O00469 737 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 PSMD14O00487 310 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 PSMA7O14818 248 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 SMPD2O60906 423 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 SEC22BO75396 215 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 RECQL5O94762 991 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 REC8O95072 547 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 NKX2-2O95096 273 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 MT-CO3P00414 261 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 SLPIP03973 132 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CD63P08962 238 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CYP2A6P11509 494 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 ZNF8P17098 575 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 MAPK3P27361 379 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 DUSP1P28562 367 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CTGFP29279 349 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 TYK2P29597 1187 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 IGHMBP2P38935 993 aaKnown RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 RABIFP47224 123 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 GNAQP50148 359 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 PLCD1P51178 756 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CCR3P51677 355 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 JAK3P52333 1124 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CSE1LP55060 971 aaKnown RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 TUBB4BP68371 445 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CFHR3Q02985 330 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 FGFBP1Q14512 234 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CYP1B1Q16678 543 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 GSTA3Q16772 222 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 MEP1BQ16820 701 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 PFKFB3Q16875 520 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CXorf66Q5JRM2 361 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 GLRA4Q5JXX5 417 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 IGFL4Q6B9Z1 124 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 TMEM88Q6PEY1 159 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 C11orf88Q6PI97 169 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 TMEM270Q6UE05 265 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 GLDNQ6ZMI3 551 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CAMKMTQ7Z624 323 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 TADA2BQ86TJ2 420 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 GPAT4Q86UL3 456 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 FAM160B2Q86V87 743 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CNTN4Q8IWV2 1026 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 DHX40Q8IX18 779 aaKnown RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CCAR2Q8N163 923 aaKnown RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CPXM2Q8N436 756 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 C12orf76Q8N812 135 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 TC2NQ8N9U0 490 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 ZBTB44Q8NCP5 570 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 SRFBP1Q8NEF9 429 aaKnown RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 OR52L2PQ8NGH6 319 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 SETD6Q8TBK2 473 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 HSPH1Q92598 858 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 N4BP2L2Q92802 583 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 ZNF622Q969S3 477 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 FAM162AQ96A26 154 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 NEK1Q96PY6 1258 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 RAB3IPQ96QF0 476 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 OR2A14Q96R47 310 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 PRR25Q96S07 402 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 PKP4Q99569 1192 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 FAM118BQ9BPY3 351 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 NTPCRQ9BSD7 190 aaKnown RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CACNG6Q9BXT2 260 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 TEX13BQ9BXU2 312 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 ADGRE3Q9BY15 652 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 IFIH1Q9BYX4 1025 aaKnown RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 NUF2Q9BZD4 464 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 GPR88Q9GZN0 384 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 NUAK2Q9H093 628 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 TKTL2Q9H0I9 626 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 HRH4Q9H3N8 390 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 DCAF16Q9NXF7 216 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 ARHGEF38Q9NXL2 777 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 NINJ2Q9NZG7 142 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 NCKIPSDQ9NZQ3 722 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 KIAA1456Q9P272 454 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 PTGFRNQ9P2B2 879 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 C11orf21Q9P2W6 132 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 CRNNQ9UBG3 495 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 ARPP21Q9UBL0 812 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 TRIM17Q9Y577 477 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 LIPGQ9Y5X9 500 aa3.24□□□□□ -1.89
HMGB1P14-201ENST00000557424 TARSL2A2RTX5 802 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms