RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 MACROD2A1Z1Q3 448 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 GOLGA6CA6NDK9 693 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 GOLGA6BA6NDN3 693 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 GOLGA6L9A6NEM1 432 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 A8MX80 341 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 HACD1B0YJ81 288 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 KRT86O43790 486 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 PIAS2O75928 621 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 STK10O94804 968 aaKnown RBP13.85□□□□□ -0.19
VPS33B-206ENST00000557358 HLA-DQB2P05538 268 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 PYGLP06737 847 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 GOLGA6DP0CG33 693 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 CTSEP14091 401 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 NME1P15531 152 aaKnown RBP13.85□□□□□ -0.19
VPS33B-206ENST00000557358 ZNF30P17039 623 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 CTNNA1P35221 906 aaKnown RBP13.85□□□□□ -0.19
VPS33B-206ENST00000557358 SEMG2Q02383 582 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 ZNF211Q13398 564 aaPredicted RBP13.85□□□□□ -0.19
VPS33B-206ENST00000557358 FZD2Q14332 565 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 INPP5AQ14642 412 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 NFATC4Q14934 902 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 SHBQ15464 509 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 WSCD2Q2TBF2 565 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 ALG1LQ6GMV1 187 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 NT5DC3Q86UY8 548 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 SLC22A18ASQ8N1D0 253 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 BAHD1Q8TBE0 780 aaPredicted RBP13.85□□□□□ -0.19
VPS33B-206ENST00000557358 CCHCR1Q8TD31 782 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 ADAMTS14Q8WXS8 1223 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 VOPP1Q96AW1 172 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 TRIM44Q96DX7 344 aaPredicted RBP13.85□□□□□ -0.19
VPS33B-206ENST00000557358 NUS1Q96E22 293 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 AGAP3Q96P47 875 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 SRPK1Q96SB4 655 aaKnown RBP13.85□□□□□ -0.19
VPS33B-206ENST00000557358 VAT1Q99536 393 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 APOOQ9BUR5 198 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 GOLPH3Q9H4A6 298 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 WDR26Q9H7D7 661 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 USP29Q9HBJ7 922 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 PCDH9Q9HC56 1237 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 PHPT1Q9NRX4 125 aaPredicted RBP13.85□□□□□ -0.19
VPS33B-206ENST00000557358 GOLGA6AQ9NYA3 693 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 NLGN3Q9NZ94 848 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 APOBEC3BQ9UH17 382 aaKnown RBP13.85□□□□□ -0.19
VPS33B-206ENST00000557358 TFR2Q9UP52 801 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 EFR3BQ9Y2G0 817 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 PCDHA3Q9Y5H8 950 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 CSNK1G3Q9Y6M4 447 aa13.85□□□□□ -0.19
VPS33B-206ENST00000557358 hCG_1818297A0A087WSY0 165 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 MIF4GDA9UHW6 222 aaKnown RBP13.84□□□□□ -0.19
VPS33B-206ENST00000557358 SCAMP1O15126 338 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 FFAR2O15552 330 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 ARHGAP6O43182 974 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 AQP9O43315 295 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 HEXIM1O94992 359 aaKnown RBP13.84□□□□□ -0.19
VPS33B-206ENST00000557358 TJP3O95049 919 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 RASGRP1O95267 797 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 ANXA6P08133 673 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 ALPIP09923 528 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 TSHRP16473 764 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 CKMT2P17540 419 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 CD86P42081 329 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 RPIAP49247 311 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 RALGDSQ12967 914 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 ILKQ13418 452 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 ELOCQ15369 112 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 ZNF542PQ5EBM4 170 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 ENPP7Q6UWV6 458 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 NPNTQ6UXI9 565 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 PHACTR4Q8IZ21 702 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 FSTL5Q8N475 847 aaPredicted RBP13.84□□□□□ -0.19
VPS33B-206ENST00000557358 RNF10Q8N5U6 811 aaKnown RBP13.84□□□□□ -0.19
VPS33B-206ENST00000557358 LPCAT1Q8NF37 534 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 OR4C6Q8NH72 309 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 LMX1AQ8TE12 382 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 LRRC45Q96CN5 670 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 TBATAQ96M53 351 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 WDR92Q96MX6 357 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 OLFM3Q96PB7 478 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 TDRD1Q9BXT4 1180 aaKnown RBP13.84□□□□□ -0.19
VPS33B-206ENST00000557358 MBNL1Q9NR56 388 aaKnown RBP13.84□□□□□ -0.19
VPS33B-206ENST00000557358 GPR27Q9NS67 375 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 KLHL8Q9P2G9 620 aaPredicted RBP13.84□□□□□ -0.19
VPS33B-206ENST00000557358 KLQ9UEF7 1012 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 CHKBQ9Y259 395 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 NEUROG3Q9Y4Z2 214 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 TPRP12270 2363 aaKnown RBP13.84□□□□□ -0.19
VPS33B-206ENST00000557358 LRRK1Q38SD2 2015 aa13.84□□□□□ -0.19
VPS33B-206ENST00000557358 KNTC1P50748 2209 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 COL5A1P20908 1838 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-206ENST00000557358 A0A0J9YYE9 177 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 H7C0C1 242 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 APOC4-APOC2K7ER74 178 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 HYAL3O43820 417 aaPredicted RBP13.83□□□□□ -0.2
VPS33B-206ENST00000557358 RFPL3O75679 317 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 TNFP01375 233 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 TRBC1P01850 177 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 APOC2P02655 101 aa13.83□□□□□ -0.2
VPS33B-206ENST00000557358 ATXN1LP0C7T5 689 aaKnown RBP13.83□□□□□ -0.2
VPS33B-206ENST00000557358 CTPS1P17812 591 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms