RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 CD1CP29017 333 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 RFC1P35251 1148 aaPredicted RBP12.34□□□□□ -0.43
SNX6-209ENST00000557265 TRIM23P36406 574 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 STAT1P42224 750 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 RALGDSQ12967 914 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 HSP90AA4PQ58FG1 418 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 PNCKQ6P2M8 343 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 SCYL2Q6P3W7 929 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 LIPIQ6XZB0 460 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 ZNF438Q7Z4V0 828 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 C17orf82Q86X59 251 aaPredicted RBP12.34□□□□□ -0.43
SNX6-209ENST00000557265 UMODL1-AS1Q8N2C9 162 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 GPBAR1Q8TDU6 330 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 ZDHHC1Q8WTX9 485 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 CCDC74BQ96LY2 380 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 TUBGCP5Q96RT8 1024 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 TUBGCP2Q9BSJ2 902 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 WDR26Q9H7D7 661 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
SNX6-209ENST00000557265 NOCTQ9UK39 431 aaKnown RBP12.34□□□□□ -0.43
SNX6-209ENST00000557265 PCDHGA3Q9Y5H0 932 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 UNC13CQ8NB66 2214 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 DOCK4Q8N1I0 1966 aa12.34□□□□□ -0.43
SNX6-209ENST00000557265 BSNQ9UPA5 3926 aa12.33□□□□□ -0.43
SNX6-209ENST00000557265 NOTCH2Q04721 2471 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 PRSS38A1L453 326 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 WASH4PA8MWX3 477 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 A8MX80 341 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 PDE2AO00408 941 aaPredicted RBP12.33□□□□□ -0.44
SNX6-209ENST00000557265 PES1O00541 588 aaKnown RBP12.33□□□□□ -0.44
SNX6-209ENST00000557265 ZW10O43264 779 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 GFPT2O94808 682 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 ECEL1O95672 775 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 GP1BBP13224 206 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 CCNB1P14635 433 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 CHRNB2P17787 502 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 GM2AP17900 193 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 MPSTP25325 297 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 SERPINA4P29622 427 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 UGT1A3P35503 534 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 CCR10P46092 362 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 RGRP47804 291 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 FOXK1P85037 733 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 FMO1Q01740 532 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 CDR2Q01850 454 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 BIRC2Q13490 618 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 CLPPQ16740 277 aaPredicted RBP12.33□□□□□ -0.44
SNX6-209ENST00000557265 TSR1Q2NL82 804 aaKnown RBP12.33□□□□□ -0.44
SNX6-209ENST00000557265 NKAIN2Q5VXU1 208 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 WDR59Q6PJI9 974 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 SRLQ86TD4 932 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 ZNF677Q86XU0 584 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 NRROSQ86YC3 692 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 FAM114A1Q8IWE2 563 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 CACNA2D3Q8IZS8 1091 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 PELI3Q8N2H9 469 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 PAF1Q8N7H5 531 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 MLKLQ8NB16 471 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 ART4Q93070 314 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 CDH19Q9H159 772 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 ATP13A3Q9H7F0 1226 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 CATSPERBQ9H7T0 1116 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 CARS2Q9HA77 564 aaKnown RBP12.33□□□□□ -0.44
SNX6-209ENST00000557265 PDFQ9HBH1 243 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 TUBD1Q9UJT1 453 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 B3GALT1Q9Y5Z6 326 aa12.33□□□□□ -0.44
SNX6-209ENST00000557265 PRAMEF11O60813 436 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 FUCA1P04066 466 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 GPD1P21695 349 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 CSTF2P33240 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNX6-209ENST00000557265 CASRP41180 1078 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 CSNK1DP48730 415 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 LIMK2P53671 638 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 ILF3Q12906 894 aaKnown RBP eCLIP12.32□□□□□ -0.445e-7■■■□□ 14.9
SNX6-209ENST00000557265 PTP4A2Q12974 167 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 TRA2AQ13595 282 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNX6-209ENST00000557265 NR1D2Q14995 579 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 ACOX1Q15067 660 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 AFMIDQ63HM1 303 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 TSEN2Q8NCE0 465 aaKnown RBP12.32□□□□□ -0.44
SNX6-209ENST00000557265 AGBL5Q8NDL9 886 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 CCDC112Q8NEF3 446 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 CELF6Q96J87 481 aaKnown RBP12.32□□□□□ -0.44
SNX6-209ENST00000557265 GSDMCQ9BYG8 508 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 LRRC19Q9H756 370 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 ZNF71Q9NQZ8 489 aaPredicted RBP12.32□□□□□ -0.44
SNX6-209ENST00000557265 SLC39A1Q9NY26 324 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 TAAR2Q9P1P5 351 aa12.32□□□□□ -0.44
SNX6-209ENST00000557265 USP9YO00507 2555 aaPredicted RBP12.31□□□□□ -0.44
SNX6-209ENST00000557265 TEX15Q9BXT5 2789 aa12.31□□□□□ -0.44
SNX6-209ENST00000557265 ZNF891A8MT65 544 aaPredicted RBP12.31□□□□□ -0.44
SNX6-209ENST00000557265 NKX2-8O15522 239 aa12.31□□□□□ -0.44
SNX6-209ENST00000557265 PALMO75781 387 aa12.31□□□□□ -0.44
SNX6-209ENST00000557265 CEACAM5P06731 702 aa12.31□□□□□ -0.44
SNX6-209ENST00000557265 MYCLP1P12525 358 aaPredicted RBP12.31□□□□□ -0.44
SNX6-209ENST00000557265 CR2P20023 1033 aa12.31□□□□□ -0.44
SNX6-209ENST00000557265 AK4P27144 223 aaPredicted RBP12.31□□□□□ -0.44
SNX6-209ENST00000557265 GPR3P46089 330 aa12.31□□□□□ -0.44
SNX6-209ENST00000557265 GNPDA1P46926 289 aa12.31□□□□□ -0.44
SNX6-209ENST00000557265 PAPOLAP51003 745 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms