RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 UMODL1-AS1Q8N2C9 162 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 IL22RA1Q8N6P7 574 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 CCDC112Q8NEF3 446 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 CCL4L1Q8NHW4 92 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 JOSD2Q8TAC2 188 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 EPS8L1Q8TE68 723 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 FAM172AQ8WUF8 416 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 CATSPER2Q96P56 530 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 CATSPERBQ9H7T0 1116 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 MOSPD1Q9UJG1 213 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 ANAPC2Q9UJX6 822 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 TEX15Q9BXT5 2789 aa11.93□□□□□ -0.5
ACTN1-221ENST00000556571 IGHV5-10-1A0A0J9YXX1 117 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 F8VZ95 297 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 CAPN5O15484 640 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-221ENST00000556571 PRKCGP05129 697 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 ELFN1P0C7U0 828 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 FGF3P11487 239 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-221ENST00000556571 KRT3P12035 628 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 CCNB1P14635 433 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 SERPINA4P29622 427 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 UGT1A3P35503 534 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 CASRP41180 1078 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 GPR3P46089 330 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 CSNK1DP48730 415 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 MAZP56270 477 aaKnown RBP11.92□□□□□ -0.5
ACTN1-221ENST00000556571 POLR2LP62875 67 aaKnown RBP11.92□□□□□ -0.5
ACTN1-221ENST00000556571 FOXK1P85037 733 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 NR1D2Q14995 579 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 SKIDA1Q1XH10 827 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 MIIPQ5JXC2 388 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 AFMIDQ63HM1 303 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 PNCKQ6P2M8 343 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 LIPIQ6XZB0 460 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 CLEC17AQ6ZS10 378 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 ZSWIM9Q86XI8 627 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 PYROXD2Q8N2H3 581 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 MLKLQ8NB16 471 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 AGBL5Q8NDL9 886 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 RCBTB1Q8NDN9 531 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 ZDHHC1Q8WTX9 485 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 NUDT22Q9BRQ3 303 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 C11orf70Q9BRQ4 267 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 TUBGCP2Q9BSJ2 902 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 LGR4Q9BXB1 951 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 GSDMCQ9BYG8 508 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 ASPSCR1Q9BZE9 553 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 EPN3Q9H201 632 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 WDR26Q9H7D7 661 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 ATP13A3Q9H7F0 1226 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 SPATS2LQ9NUQ6 558 aaKnown RBP11.92□□□□□ -0.5
ACTN1-221ENST00000556571 DONSONQ9NYP3 566 aa11.92□□□□□ -0.5
ACTN1-221ENST00000556571 NOCTQ9UK39 431 aaKnown RBP11.92□□□□□ -0.5
ACTN1-221ENST00000556571 RP1L1Q8IWN7 2480 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-221ENST00000556571 ARHGEF17Q96PE2 2063 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-221ENST00000556571 SPTBN1Q01082 2364 aaKnown RBP11.91□□□□□ -0.5
ACTN1-221ENST00000556571 PRSS38A1L453 326 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 ZNF891A8MT65 544 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-221ENST00000556571 FGF10O15520 208 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-221ENST00000556571 CREB3O43889 395 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 PRAMEF11O60813 436 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 FGF1P05230 155 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 LIFP15018 202 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 CD1CP29017 333 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 CSTF2P33240 577 aaKnown RBP eCLIP11.91□□□□□ -0.5
ACTN1-221ENST00000556571 RFC1P35251 1148 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-221ENST00000556571 ARSDP51689 593 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 LIMK2P53671 638 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 CDR2Q01850 454 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 ILF3Q12906 894 aaKnown RBP eCLIP11.91□□□□□ -0.5
ACTN1-221ENST00000556571 RALGDSQ12967 914 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 BIRC2Q13490 618 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 SQSTM1Q13501 440 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 PEX6Q13608 980 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 SRLQ86TD4 932 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 CACNA2D3Q8IZS8 1091 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 PAF1Q8N7H5 531 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 OR4D9Q8NGE8 314 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 SLC30A5Q8TAD4 765 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 SLC20A1Q8WUM9 679 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 ECHDC3Q96DC8 303 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 CCDC74BQ96LY2 380 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 DPYSL5Q9BPU6 564 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 DDA1Q9BW61 102 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 CARS2Q9HA77 564 aaKnown RBP11.91□□□□□ -0.5
ACTN1-221ENST00000556571 PDFQ9HBH1 243 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 TRNAU1APQ9NX07 287 aaKnown RBP11.91□□□□□ -0.5
ACTN1-221ENST00000556571 LRRK1Q38SD2 2015 aa11.91□□□□□ -0.5
ACTN1-221ENST00000556571 USP9XQ93008 2570 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-221ENST00000556571 RELNP78509 3460 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 LRP4O75096 1905 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 J3KR12 359 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 PES1O00541 588 aaKnown RBP11.9□□□□□ -0.5
ACTN1-221ENST00000556571 TEX33O43247 280 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 ECEL1O95672 775 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 MYCLP1P12525 358 aaPredicted RBP11.9□□□□□ -0.5
ACTN1-221ENST00000556571 CR2P20023 1033 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 GPD1P21695 349 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 NDST2P52849 883 aa11.9□□□□□ -0.5
ACTN1-221ENST00000556571 AIF1P55008 147 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms