RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 TRPM6Q9BX84 2022 aa15.24■□□□□ 0.03
ACTN1-217ENST00000556203 MIF4GDA9UHW6 222 aaKnown RBP15.23■□□□□ 0.03
ACTN1-217ENST00000556203 APOC4-APOC2K7ER74 178 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 TOR1BO14657 336 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 DDX3YO15523 660 aaKnown RBP15.23■□□□□ 0.03
ACTN1-217ENST00000556203 KRT86O43790 486 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 PRLP01236 227 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 APOC2P02655 101 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 CCDC175P0C221 793 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 CETN2P41208 172 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 THOP1P52888 689 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 CCZ1BP86790 482 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 CCZ1P86791 482 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-217ENST00000556203 ZNF211Q13398 564 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-217ENST00000556203 PTK2BQ14289 1009 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 INPP5AQ14642 412 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 TSPAN33Q86UF1 283 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 IFT43Q96FT9 208 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 IMP4Q96G21 291 aaKnown RBP15.23■□□□□ 0.03
ACTN1-217ENST00000556203 COQ10AQ96MF6 247 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 QKIQ96PU8 341 aaKnown RBP eCLIP15.23■□□□□ 0.03
ACTN1-217ENST00000556203 SMIM14Q96QK8 99 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 RBM15Q96T37 977 aaKnown RBP eCLIP15.23■□□□□ 0.03
ACTN1-217ENST00000556203 CDC6Q99741 560 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 PPIL1Q9Y3C6 166 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 DOCK9Q9BZ29 2069 aa15.23■□□□□ 0.03
ACTN1-217ENST00000556203 KNL1Q8NG31 2342 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 SHROOM3Q8TF72 1996 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 A0A0U1RQS6 177 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 HACD1B0YJ81 288 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 H7C0C1 242 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 MTSS1O43312 755 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 NRDCO43847 1150 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 TJP3O95049 919 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 HNF1BP35680 557 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 ATP5OP48047 213 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 RPL26P61254 145 aaKnown RBP15.22■□□□□ 0.03
ACTN1-217ENST00000556203 YPEL5P62699 121 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 WASHC5Q12768 1159 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 XRCC4Q13426 336 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 ARHGEF7Q14155 803 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 NOMO1Q15155 1222 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 KANSL1Q7Z3B3 1105 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 HSD11B1LQ7Z5J1 315 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 GLRX5Q86SX6 157 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 EID2Q8N6I1 236 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 PLA2G15Q8NCC3 412 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 ACTL9Q8TC94 416 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 HTR3CQ8WXA8 447 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 NUS1Q96E22 293 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 HES6Q96HZ4 224 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 TEKT5Q96M29 485 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 SLC25A51Q9H1U9 297 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 C10orf88Q9H8K7 445 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 GLOD4Q9HC38 313 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 KLHL8Q9P2G9 620 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-217ENST00000556203 RPL26L1Q9UNX3 145 aaKnown RBP15.22■□□□□ 0.03
ACTN1-217ENST00000556203 OR1A2Q9Y585 309 aa15.22■□□□□ 0.03
ACTN1-217ENST00000556203 A0A0J9YYE9 177 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 CAPN8A6NHC0 703 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 PSMD11O00231 422 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 PIAS2O75928 621 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 TRBC1P01850 177 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 CSF2P04141 144 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 PTMAP06454 111 aaKnown RBP15.21■□□□□ 0.03
ACTN1-217ENST00000556203 NME1P15531 152 aaKnown RBP15.21■□□□□ 0.03
ACTN1-217ENST00000556203 DGKAP23743 735 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 CD68P34810 354 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-217ENST00000556203 ETV3P41162 512 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 OTUD4Q01804 1114 aaKnown RBP15.21■□□□□ 0.03
ACTN1-217ENST00000556203 FOXC1Q12948 553 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 EIF2B5Q13144 721 aaKnown RBP15.21■□□□□ 0.03
ACTN1-217ENST00000556203 MTM1Q13496 603 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 PCSK7Q16549 785 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 QPCTQ16769 361 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 LRRC66Q68CR7 880 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 CRTC1Q6UUV9 634 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 MACC1Q6ZN28 852 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 CBARPQ8N350 705 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-217ENST00000556203 SPATA22Q8NHS9 363 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 VAT1Q99536 393 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 FAM118BQ9BPY3 351 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 APOOQ9BUR5 198 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 ADGRE3Q9BY15 652 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 LZTFL1Q9NQ48 299 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 UCKL1Q9NWZ5 548 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 FTSJ1Q9UET6 329 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 KLF15Q9UIH9 416 aa15.21■□□□□ 0.03
ACTN1-217ENST00000556203 TMEM131Q92545 1883 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 H3BM21 787 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 FFAR2O15552 330 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 TNFSF14O43557 240 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 MT-CYBP00156 380 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-217ENST00000556203 FTH1P19P0C7X4 201 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 JUNDP17535 347 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 HTR1BP28222 390 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 RBL1P28749 1068 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 PMLP29590 882 aa15.2■□□□□ 0.02
ACTN1-217ENST00000556203 EIF3EP60228 445 aaKnown RBP15.2■□□□□ 0.02
ACTN1-217ENST00000556203 HNRNPKP61978 463 aaKnown RBP eCLIP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms