RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 PIH1D2Q8WWB5 315 aa9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 OTUB2Q96DC9 234 aa9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 ATXN7L3BQ96GX2 97 aa9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 CDKN2AIPNLQ96HQ2 116 aa9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 DNAJC1Q96KC8 554 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 PITPNM3Q9BZ71 974 aa9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 TLE6Q9H808 572 aa9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 ZNF358Q9NW07 568 aa9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 MARCH4Q9P2E8 410 aaPredicted RBP9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 TBC1D14Q9P2M4 693 aa9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 HELZP42694 1942 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-223ENST00000556142 A0A096LPK6 155 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 FAM95CA0A1B0GW59 222 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CCDC162PA2VCL2 907 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 GRXCR2A6NFK2 248 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 OR51F1A6NGY5 319 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CCL22O00626 93 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 BUD23O43709 281 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 PGLSO95336 258 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 GOT2P00505 430 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 PIRTP0C851 137 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 NRIP1P48552 1158 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 AP1S1P61966 158 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 IRF9Q00978 393 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 SEMA3AQ14563 771 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CBX2Q14781 532 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 PTPRRQ15256 657 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CDKN3Q16667 212 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 PUS10Q3MIT2 529 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 ZNF470Q6ECI4 717 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 METTL3Q86U44 580 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 ADIPOR2Q86V24 386 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CILP2Q8IUL8 1156 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 SLC41A1Q8IVJ1 513 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CEP97Q8IW35 865 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 PNPLA1Q8N8W4 532 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CALML6Q8TD86 181 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 ING5Q8WYH8 240 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 SMG7Q92540 1137 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 ISG20Q96AZ6 181 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 MECRQ9BV79 373 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 SUDS3Q9H7L9 328 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 FBXO6Q9NRD1 293 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 EVLQ9UI08 416 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 HS3ST2Q9Y278 367 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 ANKRD6Q9Y2G4 727 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 MRPS23Q9Y3D9 190 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 USP15Q9Y4E8 981 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 ATXN2Q99700 1313 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 TARM1B6A8C7 271 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 SNNO75324 88 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CRTAMO95727 393 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 SBK3P0C264 359 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CISD3P0C7P0 127 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 SLC35E2BP0CK96 405 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 FGF3P11487 239 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 TYRP14679 529 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 ALDH3A1P30838 453 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 PGGT1BP53609 377 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 TAS2R39P59534 338 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 TMPRSS15P98073 1019 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 TIAL1Q01085 375 aaKnown RBP eCLIP9.5□□□□□ -0.891e-6■■□□□ 13.9
HNRNPC-223ENST00000556142 DMC1Q14565 340 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 USP10Q14694 798 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 PCLAFQ15004 111 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 ATG2AQ2TAZ0 1938 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 GLIPR1L2Q4G1C9 344 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 LY6G5CQ5SRR4 150 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 RBM20Q5T481 1227 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 TMEM215Q68D42 235 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 TMEM184AQ6ZMB5 413 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 FAM47EQ6ZV65 393 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 SPATA21Q7Z572 469 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 PTAR1Q7Z6K3 402 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 YTHDF3Q7Z739 585 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CELF5Q8N6W0 485 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 ANKS4BQ8N8V4 417 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 LPCAT1Q8NF37 534 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 RAB3IL1Q8TBN0 382 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 EID2BQ96D98 161 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 RMDN1Q96DB5 314 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 GPR78Q96P69 363 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 CDCA3Q99618 268 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 OMDQ99983 421 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 BBS2Q9BXC9 721 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 ADGRE3Q9BY15 652 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 IQCGQ9H095 443 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 SFXN1Q9H9B4 322 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 SLC39A10Q9ULF5 831 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 WNT6Q9Y6F9 365 aa9.5□□□□□ -0.89
HNRNPC-223ENST00000556142 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.49□□□□□ -0.89
HNRNPC-223ENST00000556142 NEDD8-MDP1E9PL57 170 aa9.49□□□□□ -0.89
HNRNPC-223ENST00000556142 G3V2L1 256 aa9.49□□□□□ -0.89
HNRNPC-223ENST00000556142 H7C0S8 307 aa9.49□□□□□ -0.89
HNRNPC-223ENST00000556142 CD3EAPO15446 510 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-223ENST00000556142 PHGDHO43175 533 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-223ENST00000556142 TGDSO95455 350 aa9.49□□□□□ -0.89
HNRNPC-223ENST00000556142 GLP2RO95838 553 aa9.49□□□□□ -0.89
HNRNPC-223ENST00000556142 PABPC1P11940 636 aaKnown RBP9.49□□□□□ -0.89
HNRNPC-223ENST00000556142 COL6A2P12110 1019 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms