RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SOCS4Q8WXH5 440 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 RSPH1Q8WYR4 309 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 CASP10Q92851 521 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 FATE1Q969F0 183 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 PABPC5Q96DU9 382 aaKnown RBP7.02□□□□□ -1.28
TDP1-213ENST00000555880 PHF21BQ96EK2 531 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 IMP4Q96G21 291 aaKnown RBP7.02□□□□□ -1.28
TDP1-213ENST00000555880 C1orf74Q96LT6 269 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 KLHL32Q96NJ5 620 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 ASB2Q96Q27 587 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 OLFM1Q99784 485 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 HAUS8Q9BT25 410 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 TRIM15Q9C019 465 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 ZNF696Q9H7X3 374 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 TMLHEQ9NVH6 421 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 MPP6Q9NZW5 540 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 CCDC167Q9P0B6 97 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 LZTS1Q9Y250 596 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 VWA7Q9Y334 891 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 TRAF6Q9Y4K3 522 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 PCDHGA7Q9Y5G6 932 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 HS3ST4Q9Y661 456 aa7.02□□□□□ -1.28
TDP1-213ENST00000555880 NLRC5Q86WI3 1866 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 A0A1W2PQH9 124 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 BBIP1A8MTZ0 92 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 WASH4PA8MWX3 477 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 E7ENX8 843 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 AURKAO14965 403 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 SUPT7LO94864 414 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 SMIM18P0DKX4 95 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 AKR1A1P14550 325 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 ETS2P15036 469 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 RHOQP17081 205 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 IMPDH1P20839 514 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 GRIA2P42262 883 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 ATP4BP51164 291 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 PLK1P53350 603 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 INHBCP55103 352 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 MLLT6P55198 1093 aaPredicted RBP7.02□□□□□ -1.29
TDP1-213ENST00000555880 C1QTNF8P60827 252 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 RHDQ02161 417 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 LSAMPQ13449 338 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 SLC14A2Q15849 920 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 CCL14Q16627 93 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 GEN1Q17RS7 908 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 KIF19Q2TAC6 998 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 GNASQ5JWF2 1037 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 C6orf52Q5T4I8 152 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 IL23RQ5VWK5 629 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 FAM45BPQ6NSW5 357 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 PRMT9Q6P2P2 845 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 HACD2Q6Y1H2 254 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 B3GNT6Q6ZMB0 384 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 PTAR1Q7Z6K3 402 aaPredicted RBP7.02□□□□□ -1.29
TDP1-213ENST00000555880 TFAP2DQ7Z6R9 452 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 TICAM1Q8IUC6 712 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 SCN4BQ8IWT1 228 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 LILRA2Q8N149 483 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 FAM156AQ8NDB6 213 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 OR10T2Q8NGX3 314 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 FAM45AQ8TCE6 357 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 HASPINQ8TF76 798 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 ROPN1LQ96C74 230 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 L3HYPDHQ96EM0 354 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 C19orf60Q96EN9 201 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 UBXN10Q96LJ8 280 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 PRICKLE1Q96MT3 831 aaPredicted RBP7.02□□□□□ -1.29
TDP1-213ENST00000555880 PKMYT1Q99640 499 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 OSBPL11Q9BXB4 747 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 ZYG11BQ9C0D3 744 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 MFSD1Q9H3U5 465 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 ALG9Q9H6U8 611 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 ATP13A1Q9HD20 1204 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 RGS18Q9NS28 235 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 NDFIP2Q9NV92 336 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 UBAP1Q9NZ09 502 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 PTTG2Q9NZH5 202 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 APPL1Q9UKG1 709 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 CROTQ9UKG9 612 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 SARDHQ9UL12 918 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 TLR6Q9Y2C9 796 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 DOCK4Q8N1I0 1966 aa7.02□□□□□ -1.29
TDP1-213ENST00000555880 NRP2O60462 931 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 ZNF623O75123 536 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 TRPA1O75762 1119 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 RNASEH2AO75792 299 aaKnown RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 GLP2RO95838 553 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 CHRNA1P02708 482 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 CAPNS1P04632 268 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 ATP6V1B1P15313 513 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 TYMPP19971 482 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 KCNA5P22460 613 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 SLC7A1P30825 629 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 ACADVLP49748 655 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 NR1H2P55055 460 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 TBX4P57082 545 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 HERVK_113P63132 956 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 NFKB2Q00653 900 aa7.01□□□□□ -1.29
TDP1-213ENST00000555880 YWHAHQ04917 246 aaPredicted RBP7.01□□□□□ -1.29
TDP1-213ENST00000555880 LRP8Q14114 963 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms