RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 LRRC57Q8N9N7 239 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 MCPH1Q8NEM0 835 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 TMEM163Q8TC26 289 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 ADAMTS15Q8TE58 950 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 GDPD5Q8WTR4 605 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 TMEM174Q8WUU8 243 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 MPHOSPH8Q99549 860 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 WDR77Q9BQA1 342 aaPredicted RBP3.54□□□□□ -1.84
SRP54-209ENST00000555746 USP44Q9H0E7 712 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 SLC25A18Q9H1K4 315 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 BRF2Q9HAW0 419 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 FZD3Q9NPG1 666 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 C20orf141Q9NUB4 165 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 DECR2Q9NUI1 292 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 IRAK4Q9NWZ3 460 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 MTMR10Q9NXD2 777 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 TBC1D14Q9P2M4 693 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 PLEKHB1Q9UF11 243 aaPredicted RBP3.54□□□□□ -1.84
SRP54-209ENST00000555746 COG5Q9UP83 839 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.54□□□□□ -1.84
SRP54-209ENST00000555746 RAP2CQ9Y3L5 183 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 PCDHGB5Q9Y5G0 923 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 RAI2Q9Y5P3 530 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 EYSQ5T1H1 3165 aa3.54□□□□□ -1.84
SRP54-209ENST00000555746 TRPM3Q9HCF6 1732 aaPredicted RBP3.53□□□□□ -1.84
SRP54-209ENST00000555746 KANK1Q14678 1352 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 TPRP12270 2363 aaKnown RBP3.53□□□□□ -1.84
SRP54-209ENST00000555746 EVPLQ92817 2033 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 A0A0G2JLW4 131 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 TEX13CA0A0J9YWL9 993 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 WDR91A4D1P6 747 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 CLGNO14967 610 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 LDLRAD4O15165 306 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 TACC1O75410 805 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 BAIAP3O94812 1187 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 NDUFB8O95169 186 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 CLEC3BP05452 202 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 HEXAP06865 529 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 GALTP07902 379 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 TMEM191BP0C7N4 346 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 UBL4AP11441 157 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 ENO3P13929 434 aaPredicted RBP3.53□□□□□ -1.84
SRP54-209ENST00000555746 PSMA4P25789 261 aaKnown RBP3.53□□□□□ -1.84
SRP54-209ENST00000555746 ME1P48163 572 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 CCR9P51686 369 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 EFNA5P52803 228 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 FOXD4Q12950 439 aaPredicted RBP3.53□□□□□ -1.84
SRP54-209ENST00000555746 KCTD2Q14681 263 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 TAF11Q15544 211 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 DUSP6Q16828 381 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 HYIQ5T013 277 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 TXNDC8Q6A555 127 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 TMEM71Q6P5X7 295 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 PARM1Q6UWI2 310 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 TMTC3Q6ZXV5 915 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 MOB3CQ70IA8 216 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 TRAPPC11Q7Z392 1133 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 CHD1LQ86WJ1 897 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 CAMK1DQ8IU85 385 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 FAM217AQ8IXS0 508 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 DIS3L2Q8IYB7 885 aaKnown RBP3.53□□□□□ -1.84
SRP54-209ENST00000555746 RBFAQ8N0V3 343 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 CADM3Q8N126 398 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 DEFB123Q8N688 67 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 NANOGP1Q8N7R0 232 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 TEX45Q8NA69 505 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 ATOH1Q92858 354 aaPredicted RBP3.53□□□□□ -1.84
SRP54-209ENST00000555746 ZNF622Q969S3 477 aaKnown RBP eCLIP3.53□□□□□ -1.845e-8■□□□□ 10.1
SRP54-209ENST00000555746 KLHL29Q96CT2 875 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 SAAL1Q96ER3 474 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 SPRTNQ9H040 489 aaPredicted RBP3.53□□□□□ -1.84
SRP54-209ENST00000555746 PDCL3Q9H2J4 239 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 SNTG1Q9NSN8 517 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 SMC4Q9NTJ3 1288 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 OLA1Q9NTK5 396 aaKnown RBP3.53□□□□□ -1.84
SRP54-209ENST00000555746 ZBTB40Q9NUA8 1239 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 BABAM1Q9NWV8 329 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 PNMA2Q9UL42 364 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 CAMK2AQ9UQM7 478 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 GPR179Q6PRD1 2367 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 PAPPA2Q9BXP8 1791 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 CENPFP49454 3210 aa3.53□□□□□ -1.84
SRP54-209ENST00000555746 PRUNE2Q8WUY3 3088 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 IQGAP3Q86VI3 1631 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 WNK3Q9BYP7 1800 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 NPIPB15A6NHN6 443 aaPredicted RBP3.52□□□□□ -1.85
SRP54-209ENST00000555746 CCER2I3L3R5 266 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 SOCS2O14508 198 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 PPEF2O14830 753 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 ZC3H11AO75152 810 aaKnown RBP eCLIP3.52□□□□□ -1.85
SRP54-209ENST00000555746 CLDN7O95471 211 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 ZNF8P17098 575 aaPredicted RBP3.52□□□□□ -1.85
SRP54-209ENST00000555746 CHRNB2P17787 502 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 CHMP24386 653 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 TBXAS1P24557 533 aaPredicted RBP3.52□□□□□ -1.85
SRP54-209ENST00000555746 RFC1P35251 1148 aaPredicted RBP3.52□□□□□ -1.85
SRP54-209ENST00000555746 CPOXP36551 454 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 AVPR1AP37288 418 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 GABRB2P47870 512 aa3.52□□□□□ -1.85
SRP54-209ENST00000555746 EIF5P55010 431 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms