RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ZNF500O60304 480 aaPredicted RBP5.53□□□□□ -1.52
VRK1-205ENST00000555402 NDUFS3O75489 264 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 SLC25A12O75746 678 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 BEST1O76090 585 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 RB1P06400 928 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 ETFAP13804 333 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 HOXD9P28356 352 aaPredicted RBP5.53□□□□□ -1.52
VRK1-205ENST00000555402 PIK3CAP42336 1068 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 HTR6P50406 440 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 STK4Q13043 487 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 AIMP2Q13155 320 aaKnown RBP5.53□□□□□ -1.52
VRK1-205ENST00000555402 PLEKHS1Q5SXH7 462 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 C10orf25Q5T742 122 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 HEPHL1Q6MZM0 1159 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 NOXA1Q86UR1 476 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 DENND6AQ8IWF6 608 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 TMEM174Q8WUU8 243 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 OTULINQ96BN8 352 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 SERINC2Q96SA4 455 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 SLF1Q9BQI6 1058 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 HIPK2Q9H2X6 1198 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 FOXP1Q9H334 677 aaPredicted RBP5.53□□□□□ -1.52
VRK1-205ENST00000555402 MAGEE1Q9HCI5 957 aa5.53□□□□□ -1.52
VRK1-205ENST00000555402 RANGRFQ9HD47 186 aaPredicted RBP5.53□□□□□ -1.52
VRK1-205ENST00000555402 FAM237AA0A1B0GTK4 181 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 SYNDIG1LA6NDD5 238 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 OR2C1O95371 312 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 MYZAPP0CAP1 466 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 ZNF182P17025 639 aaPredicted RBP5.52□□□□□ -1.53
VRK1-205ENST00000555402 AVPR1AP37288 418 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 EIF2DP41214 584 aaKnown RBP5.52□□□□□ -1.53
VRK1-205ENST00000555402 UBA7P41226 1012 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 GALCP54803 685 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 CDH12P55289 794 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 SORDQ00796 357 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 CALD1Q05682 793 aaKnown RBP5.52□□□□□ -1.53
VRK1-205ENST00000555402 LRMPQ12912 555 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 ESCO2Q56NI9 601 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 FBXO46Q6PJ61 603 aaPredicted RBP5.52□□□□□ -1.53
VRK1-205ENST00000555402 GLDNQ6ZMI3 551 aaPredicted RBP5.52□□□□□ -1.53
VRK1-205ENST00000555402 GPSM1Q86YR5 675 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 CCDC13Q8IYE1 715 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 PARP16Q8N5Y8 322 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 FBXL8Q96CD0 374 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 ARHGEF26Q96DR7 871 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 SAT2Q96F10 170 aaPredicted RBP5.52□□□□□ -1.53
VRK1-205ENST00000555402 TMEM68Q96MH6 324 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 CTAGE1Q96RT6 745 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 TKTL2Q9H0I9 626 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 PLSCR4Q9NRQ2 329 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 MSRB1Q9NZV6 116 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 ABI3Q9P2A4 366 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 COG5Q9UP83 839 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 A3GALT2U3KPV4 340 aa5.52□□□□□ -1.53
VRK1-205ENST00000555402 SMAD6O43541 496 aaKnown RBP5.51□□□□□ -1.53
VRK1-205ENST00000555402 PLOD3O60568 738 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 TLR2O60603 784 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 ZC3H11AO75152 810 aaKnown RBP eCLIP5.51□□□□□ -1.53
VRK1-205ENST00000555402 RGS11O94810 467 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 CLDN7O95471 211 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 TMEM11P17152 192 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 SAT1P21673 171 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 SHMT1P34896 483 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 NNMTP40261 264 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 PPP3CCP48454 512 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 CXCR3P49682 368 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 MRPL12P52815 198 aaKnown RBP5.51□□□□□ -1.53
VRK1-205ENST00000555402 IFI35P80217 286 aaPredicted RBP5.51□□□□□ -1.53
VRK1-205ENST00000555402 BECN1Q14457 450 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 IRF3Q14653 427 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 LPIN1Q14693 890 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 INPP5JQ15735 1006 aaPredicted RBP5.51□□□□□ -1.53
VRK1-205ENST00000555402 NAB2Q15742 525 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 SOWAHAQ2M3V2 549 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 CXorf66Q5JRM2 361 aaPredicted RBP5.51□□□□□ -1.53
VRK1-205ENST00000555402 RAB41Q5JT25 222 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 TMEM71Q6P5X7 295 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 KDM1BQ8NB78 822 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 IGFBPL1Q8WX77 278 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 TMEM18Q96B42 140 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 PGAM5Q96HS1 289 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 ZNF570Q96NI8 536 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 NPFFR1Q9GZQ6 430 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 TASP1Q9H6P5 420 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 ANKRD10Q9NXR5 420 aa5.51□□□□□ -1.53
VRK1-205ENST00000555402 CHORDC1Q9UHD1 332 aaPredicted RBP5.51□□□□□ -1.53
VRK1-205ENST00000555402 A8MV72 311 aaPredicted RBP5.5□□□□□ -1.53
VRK1-205ENST00000555402 A8MZ25 164 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 SCAMP1O15126 338 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 MT3P25713 68 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 IRX6P78412 446 aaPredicted RBP5.5□□□□□ -1.53
VRK1-205ENST00000555402 GPR139Q6DWJ6 353 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 ZNF280DQ6N043 979 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 DEF8Q6ZN54 512 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 HAPLN4Q86UW8 402 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 PALB2Q86YC2 1186 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 HUS1BQ8NHY5 278 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 SLC35F5Q8WV83 523 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 SGCDQ92629 289 aa5.5□□□□□ -1.53
VRK1-205ENST00000555402 ZFYVE19Q96K21 471 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms