RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 RRP1P56182 461 aaKnown RBP5.46□□□□□ -1.54
VRK1-203ENST00000555067 FAM3BP58499 235 aaPredicted RBP5.46□□□□□ -1.54
VRK1-203ENST00000555067 RPL15P61313 204 aaKnown RBP5.46□□□□□ -1.54
VRK1-203ENST00000555067 BFSP1Q12934 665 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 GPR18Q14330 331 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 ADIPOQQ15848 244 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 ZNF766Q5HY98 468 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 TTI2Q6NXR4 508 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 ADGRG6Q86SQ4 1221 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 CAMK1DQ8IU85 385 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 CADM3Q8N126 398 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 NUP93Q8N1F7 819 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 VPS33AQ96AX1 596 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 MASTLQ96GX5 879 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 TSPAN18Q96SJ8 248 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 APOL6Q9BWW8 343 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 TAB2Q9NYJ8 693 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 KCND2Q9NZV8 630 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 MRPL15Q9P015 296 aaKnown RBP5.46□□□□□ -1.54
VRK1-203ENST00000555067 WDR35Q9P2L0 1181 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 LIMA1Q9UHB6 759 aaKnown RBP5.46□□□□□ -1.54
VRK1-203ENST00000555067 SLCO3A1Q9UIG8 710 aa5.46□□□□□ -1.54
VRK1-203ENST00000555067 AGAP5A6NIR3 686 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 A8MXE2 369 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 INAFM1C9JVW0 142 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 RGS14O43566 566 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 METTL18O95568 372 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 URODP06132 367 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 PEPDP12955 493 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 STMN1P16949 149 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 EEF1DP29692 281 aaKnown RBP5.45□□□□□ -1.54
VRK1-203ENST00000555067 SLC16A2P36021 539 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 HNF4AP41235 474 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 PNPLA4P41247 253 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 GPD2P43304 727 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 HSD17B4P51659 736 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 ADPRHP54922 357 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 FOXL2P58012 376 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 UFM1P61960 85 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 RPL36AP83881 106 aaKnown RBP5.45□□□□□ -1.54
VRK1-203ENST00000555067 RNASELQ05823 741 aaKnown RBP5.45□□□□□ -1.54
VRK1-203ENST00000555067 DDR1Q08345 913 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 Q0VFX4 171 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 AP1B1Q10567 949 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 TMEM115Q12893 351 aaPredicted RBP5.45□□□□□ -1.54
VRK1-203ENST00000555067 GPS2Q13227 327 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 SHBQ15464 509 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 RAB41Q5JT25 222 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 C9orf50Q5SZB4 431 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 TATDN1Q6P1N9 297 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 KLHL35Q6PF15 583 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 GSG1LQ6UXU4 331 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 IGFN1Q86VF2 1251 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 KLBQ86Z14 1044 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 CCDC105Q8IYK2 499 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 THNSL1Q8IYQ7 743 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 ADGRF2Q8IZF7 708 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 PTGR2Q8N8N7 351 aaPredicted RBP5.45□□□□□ -1.54
VRK1-203ENST00000555067 SLC2A12Q8TD20 617 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 CCDC47Q96A33 483 aaKnown RBP5.45□□□□□ -1.54
VRK1-203ENST00000555067 PGAP3Q96FM1 320 aaPredicted RBP5.45□□□□□ -1.54
VRK1-203ENST00000555067 CMTM3Q96MX0 182 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 SPAG5Q96R06 1193 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 PIGSQ96S52 555 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 ABHD1Q96SE0 405 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 HGH1Q9BTY7 390 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 ANKRD2Q9GZV1 360 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 C6orf106Q9H6K1 298 aaPredicted RBP5.45□□□□□ -1.54
VRK1-203ENST00000555067 OPA3Q9H6K4 179 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 CATSPERBQ9H7T0 1116 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 ODF2LQ9ULJ1 636 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 PTGDR2Q9Y5Y4 395 aa5.45□□□□□ -1.54
VRK1-203ENST00000555067 FAM237BA0A1B0GVD1 139 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 FRMD3A2A2Y4 597 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 CLEC18AA5D8T8 446 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 GAGE10A6NGK3 116 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 BECN2A8MW95 431 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 CSPG5O95196 566 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 SLU7O95391 586 aaKnown RBP5.44□□□□□ -1.54
VRK1-203ENST00000555067 EIF2S1P05198 315 aaKnown RBP5.44□□□□□ -1.54
VRK1-203ENST00000555067 PBX3P40426 434 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 PCYT1AP49585 367 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 ZNF131P52739 623 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 RPL7AP62424 266 aaKnown RBP5.44□□□□□ -1.54
VRK1-203ENST00000555067 UBXN1Q04323 297 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 DSC1Q08554 894 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 NEXNQ0ZGT2 675 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 TNFAIP1Q13829 316 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 NAA25Q14CX7 972 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 SLC9B1Q4ZJI4 515 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 TCP11X2Q5H9J9 407 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 DNTTIP2Q5QJE6 756 aaKnown RBP5.44□□□□□ -1.54
VRK1-203ENST00000555067 NCEH1Q6PIU2 408 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 RAPH1Q70E73 1250 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 SDCCAG8Q86SQ7 713 aaPredicted RBP5.44□□□□□ -1.54
VRK1-203ENST00000555067 LINC00346Q8IVM7 164 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 SCN4BQ8IWT1 228 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 TEX9Q8N6V9 391 aa5.44□□□□□ -1.54
VRK1-203ENST00000555067 TDRD5Q8NAT2 981 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms