RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 PSMD11O00231 422 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 TRIM38O00635 465 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 TPP1O14773 563 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 APOL1O14791 398 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 AQP9O43315 295 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 SIGLEC6O43699 453 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 SPOPO43791 374 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 LZTS3O60299 673 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 RECQL5O94762 991 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 HEXIM1O94992 359 aaKnown RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 NDUFA10O95299 355 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 KRT1P04264 644 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 PRKCGP05129 697 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 HLA-DQB2P05538 268 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 HOXC4P09017 264 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 C1QTNF9P0C862 333 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 ALPPL2P10696 532 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 CYP2A6P11509 494 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 JUNDP17535 347 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 GM2AP17900 193 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 CDC25BP30305 580 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 VIPR1P32241 457 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 IFI35P80217 286 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 DNAJC3Q13217 504 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 NFATC4Q14934 902 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 PDK1Q15118 436 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 CNGA3Q16281 694 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 HS1BP3Q53T59 392 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 ARMC12Q5T9G4 340 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 ESRP1Q6NXG1 681 aaKnown RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 CCNI2Q6ZMN8 369 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 KDM7AQ6ZMT4 941 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 TMTC1Q8IUR5 882 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 RAVER1Q8IY67 606 aaKnown RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 KATNAL2Q8IYT4 538 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 PHACTR4Q8IZ21 702 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 CBARPQ8N350 705 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 KDF1Q8NAX2 398 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 ATL2Q8NHH9 583 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 TPCN2Q8NHX9 752 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 ARRDC2Q8TBH0 407 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 PIH1D2Q8WWB5 315 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 SCRN2Q96FV2 425 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 COQ10AQ96MF6 247 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 MCCC1Q96RQ3 725 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 IL12RB2Q99665 862 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 SEMA3CQ99985 751 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 APOOQ9BUR5 198 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 DUSP23Q9BVJ7 150 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 REPIN1Q9BWE0 567 aaKnown RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 TDRD1Q9BXT4 1180 aaKnown RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 SLC6A16Q9GZN6 736 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 BRD8Q9H0E9 1235 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 USP29Q9HBJ7 922 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 B4GALT6Q9UBX8 382 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 PNMA8BQ9ULN7 279 aaPredicted RBP7.55□□□□□ -1.2
LINC00640-201ENST00000554409 ALG6Q9Y672 507 aa7.55□□□□□ -1.2
LINC00640-201ENST00000554409 COL27A1Q8IZC6 1860 aaPredicted RBP7.54□□□□□ -1.2
LINC00640-201ENST00000554409 LY6G6EA0A0G2JKS1 128 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 NPIPB15A6NHN6 443 aaPredicted RBP7.54□□□□□ -1.2
LINC00640-201ENST00000554409 SOWAHDA6NJG2 315 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 K7ESM1 405 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 PPP1R12AO14974 1030 aaPredicted RBP7.54□□□□□ -1.2
LINC00640-201ENST00000554409 IPO7O95373 1038 aaKnown RBP7.54□□□□□ -1.2
LINC00640-201ENST00000554409 MAP3K6O95382 1288 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 CKMT1AP12532 417 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 KRT10P13645 584 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 ZNF30P17039 623 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 TGM2P21980 687 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 CA4P22748 312 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 LHCGRP22888 699 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 HTR1BP28222 390 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 TEAD1P28347 426 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 TRIM23P36406 574 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 CDKN2BP42772 138 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 NOP2P46087 812 aaKnown RBP7.54□□□□□ -1.2
LINC00640-201ENST00000554409 NR2C2P49116 596 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 BLKP51451 505 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 KIAA1024LP59773 190 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 RPL26P61254 145 aaKnown RBP7.54□□□□□ -1.2
LINC00640-201ENST00000554409 SEMG2Q02383 582 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 DSC2Q02487 901 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 PPARDQ03181 441 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 ITKQ08881 620 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 TFDP2Q14188 446 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 IHHQ14623 411 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 INPP5AQ14642 412 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 SLC14A2Q15849 920 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 ST3GAL2Q16842 350 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 ZNF542PQ5EBM4 170 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 ZCCHC8Q6NZY4 707 aaKnown RBP7.54□□□□□ -1.2
LINC00640-201ENST00000554409 DHRS13Q6UX07 377 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 MFSD7Q6UXD7 560 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 SPOCD1Q6ZMY3 1216 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 USP45Q70EL2 814 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 TMPRSS12Q86WS5 348 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 TMEM139Q8IV31 216 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 PARP9Q8IXQ6 854 aa7.54□□□□□ -1.2
LINC00640-201ENST00000554409 RBFAQ8N0V3 343 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms