RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 IRF5Q13568 498 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC14A2Q15849 920 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 PSMD5Q16401 504 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 FSCN1Q16658 493 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 FBXO48Q5FWF7 155 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ZNF678Q5SXM1 525 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 AGAP9Q5VTM2 703 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 GDF6Q6KF10 455 aaPredicted RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ZNF549Q6P9A3 640 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 KIAA0408Q6ZU52 694 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 LARP4Q71RC2 724 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ISCA2Q86U28 154 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 CARM1Q86X55 608 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 CIR1Q86X95 450 aaPredicted RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 PGBD5Q8N414 524 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 OR52K2Q8NGK3 314 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 TMIGD2Q96BF3 282 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 PABPC5Q96DU9 382 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 C19orf60Q96EN9 201 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 NSUN5Q96P11 429 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ACBD6Q9BR61 282 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SLC25A51Q9H1U9 297 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 IL1RL2Q9HB29 575 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SPAG4Q9NPE6 437 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 VPS45Q9NRW7 570 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 TBC1D13Q9NVG8 400 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 DDX18Q9NVP1 670 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 TMEM181Q9P2C4 612 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 EPS15L1Q9UBC2 864 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 HSFX1Q9UBD0 423 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 CRYL1Q9Y2S2 319 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 TRAF6Q9Y4K3 522 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 HTTP42858 3142 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 H3BMM5 538 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 H3BSA7 217 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 FXYD1O00168 92 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 NR5A2O00482 541 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 NME4O00746 187 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SOCS2O14508 198 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 NRP2O60462 931 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 S1PR4O95977 384 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SNRPB2P08579 225 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ATXN1LP0C7T5 689 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 PSMC3P17980 439 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 CAPN3P20807 821 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 GPX3P22352 226 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 CD52P31358 61 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 KPNA2P52292 529 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SH3BP2P78314 561 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ITKQ08881 620 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 GRB7Q14451 532 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 OR4D1Q15615 310 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 UGT3A2Q3SY77 523 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 PABPC1LQ4VXU2 614 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SIRPB2Q5JXA9 342 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 OVOS1Q6IE37 1185 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 TIGD7Q6NT04 549 aaPredicted RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ARHGAP22Q7Z5H3 698 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 EPHX4Q8IUS5 362 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ZNF683Q8IZ20 524 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 NUP93Q8N1F7 819 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 SCML4Q8N228 414 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 OR6P1Q8NGX9 317 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 RSPH1Q8WYR4 309 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 HDAC10Q969S8 669 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 PSMG2Q969U7 264 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 MYEOVQ96EZ4 313 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ZFRQ96KR1 1074 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 RANBP9Q96S59 729 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 PRKD2Q9BZL6 878 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 NOL11Q9H8H0 719 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 ABCC13Q9NSE7 274 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 DUS2Q9NX74 493 aaKnown RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 PLK2Q9NYY3 685 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 BCAP29Q9UHQ4 241 aa6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 HEMK1Q9Y5R4 338 aaPredicted RBP6.95□□□□□ -1.3
LINC-ROR-201ENST00000553704 CROCCQ5TZA2 2017 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 ARHGEF37A1IGU5 675 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 MROH6A6NGR9 719 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 UBXN8O00124 270 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 PIP5K1BO14986 540 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 MUSKO15146 869 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 CYP11A1P05108 521 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 PIRTP0C851 137 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 IMPDH1P20839 514 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 ETFBP38117 255 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 GRIK1P39086 918 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 GRIA3P42263 894 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 HSPA13P48723 471 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 APLP1P51693 650 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 CDH15P55291 814 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 USP46P62068 366 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 TXNL4AP83876 142 aaKnown RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 STX5Q13190 355 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 CAPRIN1Q14444 709 aaKnown RBP6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 ACAP2Q15057 778 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 FAM45BPQ6NSW5 357 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 KLC3Q6P597 504 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 CXCL17Q6UXB2 119 aa6.94□□□□□ -1.3
LINC-ROR-201ENST00000553704 B3GNT6Q6ZMB0 384 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms