RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TAOK1Q7L7X3 1001 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 CHSY1Q86X52 802 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TBC1D3Q8IZP1 549 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-209ENST00000553659 PQLC3Q8N755 202 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 MFSD2AQ8NA29 543 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 OR2W6PQ8NHA6 318 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 PCDH19Q8TAB3 1148 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 TLCD1Q96CP7 247 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 NXPE2Q96DL1 559 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 CSPG4P5Q96PW8 444 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 KDM4CQ9H3R0 1056 aa16.19■□□□□ 0.18
ACTN1-209ENST00000553659 A0A087WUV0 522 aaPredicted RBP16.18■□□□□ 0.18
ACTN1-209ENST00000553659 KCNU1A8MYU2 1149 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 F5H5T6 163 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 M0QYT0 321 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 EPHA8P29322 1005 aaPredicted RBP16.18■□□□□ 0.18
ACTN1-209ENST00000553659 PHBP35232 272 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 RPL22P35268 128 aaKnown RBP16.18■□□□□ 0.18
ACTN1-209ENST00000553659 DRD3P35462 400 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 MAGEA4P43358 317 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 HCAR3P49019 387 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 ACADVLP49748 655 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 PPP2R2AP63151 447 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 BNIP3Q12983 259 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 MMRN1Q13201 1228 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 EIF4EBP2Q13542 120 aaPredicted RBP16.18■□□□□ 0.18
ACTN1-209ENST00000553659 PPP6R3Q5H9R7 873 aaPredicted RBP16.18■□□□□ 0.18
ACTN1-209ENST00000553659 KCTD16Q68DU8 428 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 PRPF39Q86UA1 669 aaKnown RBP16.18■□□□□ 0.18
ACTN1-209ENST00000553659 OXR1Q8N573 874 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 ATP6V0D2Q8N8Y2 350 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 FAM131CQ96AQ9 280 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 DCBLD2Q96PD2 775 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 KCTD15Q96SI1 283 aaPredicted RBP16.18■□□□□ 0.18
ACTN1-209ENST00000553659 PRMT1Q99873 361 aaKnown RBP16.18■□□□□ 0.18
ACTN1-209ENST00000553659 NINJ2Q9NZG7 142 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 SLC12A6Q9UHW9 1150 aa16.18■□□□□ 0.18
ACTN1-209ENST00000553659 CELSR3Q9NYQ7 3312 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 EIF4E1BA6NMX2 242 aaKnown RBP16.17■□□□□ 0.18
ACTN1-209ENST00000553659 ALOX15BO15296 676 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 SLC7A4O43246 635 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 STK10O94804 968 aaKnown RBP16.17■□□□□ 0.18
ACTN1-209ENST00000553659 VAV1P15498 845 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 HTR7P34969 479 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 NUDT1P36639 197 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 ABCG1P45844 678 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 VASPP50552 380 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-209ENST00000553659 OXCT1P55809 520 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 PPP2CBP62714 309 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 PPP2CAP67775 309 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 ILKQ13418 452 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 HIF1AQ16665 826 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 CA9Q16790 459 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 NAPEPLDQ6IQ20 393 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 IQCHQ86VS3 1027 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 CNPY4Q8N129 248 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 PDIK1LQ8N165 341 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 NAT8LQ8N9F0 302 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 FAM71DQ8N9W8 422 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 FRS2Q8WU20 508 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 CRELD1Q96HD1 420 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 QKIQ96PU8 341 aaKnown RBP eCLIP16.17■□□□□ 0.18
ACTN1-209ENST00000553659 NRSN2Q9GZP1 204 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 KLC2Q9H0B6 622 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 BRD8Q9H0E9 1235 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 GPATCH2LQ9NWQ4 482 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 FETUBQ9UGM5 382 aa16.17■□□□□ 0.18
ACTN1-209ENST00000553659 NOVA2Q9UNW9 492 aaKnown RBP16.17■□□□□ 0.18
ACTN1-209ENST00000553659 IGSF10Q6WRI0 2623 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 PPP1R12AO14974 1030 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-209ENST00000553659 MAGEC1O60732 1142 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 SPAG6O75602 509 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 SHBGP04278 402 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 ZSCAN5DPP0CG00 497 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 SLC2A3P11169 496 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 CLDN6P56747 220 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 PITX1P78337 314 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-209ENST00000553659 OVGP1Q12889 678 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 TARDBPQ13148 414 aaKnown RBP eCLIP16.16■□□□□ 0.18
ACTN1-209ENST00000553659 RTP5Q14D33 572 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 RASA2Q15283 850 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 HES3Q5TGS1 186 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 TTC39BQ5VTQ0 682 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-209ENST00000553659 FAM46CQ5VWP2 391 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 FBXL19Q6PCT2 694 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 KANSL1Q7Z3B3 1105 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 DSG4Q86SJ6 1040 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 FAM131BQ86XD5 332 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 SPATS2Q86XZ4 545 aaKnown RBP16.16■□□□□ 0.18
ACTN1-209ENST00000553659 SH2D3CQ8N5H7 860 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 CCDC185Q8N715 623 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 GLIS1Q8NBF1 620 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 OR8D1Q8WZ84 308 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 CPT1BQ92523 772 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 SAYSD1Q9NPB0 183 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 SAE1Q9UBE0 346 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-209ENST00000553659 DMTF1Q9Y222 760 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 HEY1Q9Y5J3 304 aa16.16■□□□□ 0.18
ACTN1-209ENST00000553659 AK5Q9Y6K8 562 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms