RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 MBNL1Q9NR56 388 aaKnown RBP22.89■■□□□ 1.25
TDP1-206ENST00000553569 RSPH14Q9UHP6 348 aa22.89■■□□□ 1.25
TDP1-206ENST00000553569 A0A0J9YYE9 177 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 A0A0U1RQS6 177 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 DCDC2BA2VCK2 349 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 PMPCBO75439 489 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 RECQL5O94762 991 aaPredicted RBP22.88■■□□□ 1.25
TDP1-206ENST00000553569 HEXIM1O94992 359 aaKnown RBP22.88■■□□□ 1.25
TDP1-206ENST00000553569 TRBC1P01850 177 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 PCCBP05166 539 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 HNF1BP35680 557 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 ARHGEF7Q14155 803 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 PUM1Q14671 1186 aaKnown RBP eCLIP22.88■■□□□ 1.25
TDP1-206ENST00000553569 LRRC14Q15048 493 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 ZNF423Q2M1K9 1284 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 SLC13A5Q86YT5 568 aaPredicted RBP22.88■■□□□ 1.25
TDP1-206ENST00000553569 SCRN2Q96FV2 425 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 TM7SF3Q9NS93 570 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 TRHDEQ9UKU6 1024 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 PPIL1Q9Y3C6 166 aa22.88■■□□□ 1.25
TDP1-206ENST00000553569 CFAP69A5D8W1 941 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 CAPN8A6NHC0 703 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 STK10O94804 968 aaKnown RBP22.87■■□□□ 1.25
TDP1-206ENST00000553569 KCNA4P22459 653 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 CCT8P50990 548 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 RPL26P61254 145 aaKnown RBP22.87■■□□□ 1.25
TDP1-206ENST00000553569 QPCTQ16769 361 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 WSCD2Q2TBF2 565 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 SLC22A18ASQ8N1D0 253 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 ATG4AQ8WYN0 398 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 TADA1Q96BN2 335 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 IFT43Q96FT9 208 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 ELF4Q99607 663 aaPredicted RBP22.87■■□□□ 1.25
TDP1-206ENST00000553569 ADGRE3Q9BY15 652 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 PYCARDQ9ULZ3 195 aa22.87■■□□□ 1.25
TDP1-206ENST00000553569 RPL26L1Q9UNX3 145 aaKnown RBP22.87■■□□□ 1.25
TDP1-206ENST00000553569 ENC1O14682 589 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 GM2AP17900 193 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 RABIFP47224 123 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 SLC14A2Q15849 920 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 ZNF569Q5MCW4 686 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 LRRC66Q68CR7 880 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 HSD11B1LQ7Z5J1 315 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 FAM174AQ8TBP5 190 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 FCRL5Q96RD9 977 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 GBA3Q9H227 469 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 FAM153AQ9UHL3 310 aa22.86■■□□□ 1.25
TDP1-206ENST00000553569 A0A1B0GTQ1 180 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 USP27XA6NNY8 438 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 CXCR5P32302 372 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 CDK18Q07002 472 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 ANKRD20A2Q5SQ80 823 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 ANKRD20A1Q5TYW2 823 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 ANKRD20A3Q5VUR7 823 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 ITPRIPL1Q6GPH6 555 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 CRTC1Q6UUV9 634 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 SLC35F6Q8N357 371 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 CCDC110Q8TBZ0 833 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 NUS1Q96E22 293 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 OXNAD1Q96HP4 312 aaPredicted RBP22.85■■□□□ 1.25
TDP1-206ENST00000553569 COQ10AQ96MF6 247 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 TRIB3Q96RU7 358 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 MLPHQ9BV36 600 aaPredicted RBP22.85■■□□□ 1.25
TDP1-206ENST00000553569 USP29Q9HBJ7 922 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 DNPEPQ9ULA0 475 aa22.85■■□□□ 1.25
TDP1-206ENST00000553569 ANKRD66B4E2M5 251 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 TM4SF5O14894 197 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 CEP104O60308 925 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 DFNA5O60443 496 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 ZNF883P0CG24 379 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 CD59P13987 128 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 ETV3P41162 512 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 WNT3AP56704 352 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 PFN3P60673 137 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 PDE1CQ14123 709 aaPredicted RBP22.84■■□□□ 1.25
TDP1-206ENST00000553569 AGERQ15109 404 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 TPRG1LQ5T0D9 272 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 KDELC1Q6UW63 502 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 OXR1Q8N573 874 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 FAM71DQ8N9W8 422 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 IPMKQ8NFU5 416 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 SLC35B2Q8TB61 432 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 C1orf54Q8WWF1 131 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 SPATA13Q96N96 652 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 TMEM121Q9BTD3 319 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 ERVMER34-1Q9H9K5 563 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 GPR27Q9NS67 375 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 JRKLQ9Y4A0 524 aa22.84■■□□□ 1.25
TDP1-206ENST00000553569 C1orf232A0A0U1RR37 186 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 PSMD11O00231 422 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 KIF5CO60282 957 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 ZNF189O75820 626 aaPredicted RBP22.83■■□□□ 1.25
TDP1-206ENST00000553569 C1SP09871 688 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 PIRTP0C851 137 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 PSMB4P28070 264 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 TNNT3P45378 269 aaPredicted RBP22.83■■□□□ 1.25
TDP1-206ENST00000553569 ARRB1P49407 418 aaPredicted RBP22.83■■□□□ 1.25
TDP1-206ENST00000553569 THOP1P52888 689 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 SLC14A1Q13336 389 aa22.83■■□□□ 1.25
TDP1-206ENST00000553569 INPP5AQ14642 412 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms