RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 MYO1FO00160 1098 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 PDE2AO00408 941 aaPredicted RBP15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 TNFRSF10CO14798 259 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 HTRA2O43464 458 aaPredicted RBP15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 MAFKO60675 156 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 CPP00450 1065 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 CYP1A2P05177 515 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 TPM3P06753 285 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 PLA2G2AP14555 144 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 TCF4P15884 667 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 CR2P20023 1033 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 PTMSP20962 102 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 SLC25A11Q02978 314 aaKnown RBP15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 SPIDRQ14159 915 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 KRT81Q14533 505 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 ACOX1Q15067 660 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 HADHQ16836 314 aaKnown RBP15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 ALKBH5Q6P6C2 394 aaKnown RBP15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 TP53INP2Q8IXH6 220 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 OR56A4Q8NGH8 313 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 UBL7Q96S82 380 aaPredicted RBP15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 RBM15Q96T37 977 aaKnown RBP eCLIP15.18■□□□□ 0.026e-7■■■■□ 24.1
SDR39U1-205ENST00000553546 CCDC3Q9BQI4 270 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 WDR26Q9H7D7 661 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 GULP1Q9UBP9 304 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 B4GALT6Q9UBX8 382 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 GPR34Q9UPC5 381 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 ZNF462Q96JM2 2506 aa15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 COL27A1Q8IZC6 1860 aaPredicted RBP15.18■□□□□ 0.02
SDR39U1-205ENST00000553546 A0A087X0T9 212 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 PEX11BO96011 259 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 CELA2BP08218 269 aaPredicted RBP15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 FAM228BP0C875 321 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 CYP2A6P11509 494 aaPredicted RBP15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 RBMS1P29558 406 aaKnown RBP15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 TRIM23P36406 574 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 MLLT3P42568 568 aaPredicted RBP15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 MMP13P45452 471 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 CCDC173Q0VFZ6 552 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 NFKBIBQ15653 356 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 TSR1Q2NL82 804 aaKnown RBP15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 C3orf38Q5JPI3 329 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 MARC1Q5VT66 337 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 BROXQ5VW32 411 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 CRTC1Q6UUV9 634 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 KYQ8NBH2 561 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 PLA2G15Q8NCC3 412 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 PDCD6IPQ8WUM4 868 aaKnown RBP15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 CPLX3Q8WVH0 158 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 FUBP1Q96AE4 644 aaKnown RBP15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 NUS1Q96E22 293 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 PDXPQ96GD0 296 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 HIC2Q96JB3 615 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 PRORYQ9H606 182 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 ETNK2Q9NVF9 386 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 HAUS2Q9NVX0 235 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 LCMT1Q9UIC8 334 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 PHTF1Q9UMS5 762 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 SATB2Q9UPW6 733 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 PCDHGA8Q9Y5G5 932 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 ENTPD2Q9Y5L3 495 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 PTPRQQ9UMZ3 2332 aa15.17■□□□□ 0.02
SDR39U1-205ENST00000553546 PSMD11O00231 422 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 KRT10P13645 584 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 VIPR1P32241 457 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 SSR1P43307 286 aaKnown RBP15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 UCNP55089 124 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 TLE3Q04726 772 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 CCDC122Q5T0U0 273 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 TXNRD3NBQ6F5E7 133 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 PNCKQ6P2M8 343 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 USP45Q70EL2 814 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 SPACA3Q8IXA5 215 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 NDUFAF2Q8N183 169 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 FAM71BQ8TC56 605 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 SLC39A7Q92504 469 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 ATXN7L3BQ96GX2 97 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 COQ10AQ96MF6 247 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 FCRL3Q96P31 734 aaPredicted RBP15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 SYNDIG1Q9H7V2 258 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 NOD2Q9HC29 1040 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 ASCL3Q9NQ33 180 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 SIRPGQ9P1W8 387 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 PCDHGC4Q9Y5F7 938 aa15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.16■□□□□ 0.02
SDR39U1-205ENST00000553546 CCDC187A0A096LP49 1063 aa15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 TMEM202A6NGA9 273 aa15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 TMX2-CTNND1H3BSU7 103 aa15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 NTN3O00634 580 aaPredicted RBP15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 HEXIM1O94992 359 aaKnown RBP15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 GYPCP04921 128 aa15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 MYCLP1P12525 358 aaPredicted RBP15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 ARHGEF7Q14155 803 aa15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 CNGA3Q16281 694 aa15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 ARMC12Q5T9G4 340 aa15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 TIGD7Q6NT04 549 aaPredicted RBP15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 TAF8Q7Z7C8 310 aa15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 PGBD5Q8N414 524 aa15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 ARL14Q8N4G2 192 aa15.15■□□□□ 0.02
SDR39U1-205ENST00000553546 WDR36Q8NI36 951 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms