RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 DEPDC7Q96QD5 511 aa17.98■□□□□ 0.47
PNN-202ENST00000553331 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
PNN-202ENST00000553331 NRSN2Q9GZP1 204 aa17.98■□□□□ 0.47
PNN-202ENST00000553331 GOLGA6AQ9NYA3 693 aa17.98■□□□□ 0.47
PNN-202ENST00000553331 CFAP69A5D8W1 941 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 HTRA2O43464 458 aaPredicted RBP17.97■□□□□ 0.47
PNN-202ENST00000553331 BRINP1O60477 761 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 CSO75390 466 aaKnown RBP17.97■□□□□ 0.47
PNN-202ENST00000553331 TNFP01375 233 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 KRT7P08729 469 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 ALPIP09923 528 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 TMEM253P0C7T8 217 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 TGM2P21980 687 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 VIPR1P32241 457 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 GARSP41250 739 aaKnown RBP17.97■□□□□ 0.47
PNN-202ENST00000553331 AGERQ15109 404 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 PDK2Q15119 407 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 CNGA3Q16281 694 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 PERM1Q5SV97 790 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 ARMC12Q5T9G4 340 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 KCTD16Q68DU8 428 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 ESRP1Q6NXG1 681 aaKnown RBP17.97■□□□□ 0.47
PNN-202ENST00000553331 MAP7D3Q8IWC1 876 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 FSTL5Q8N475 847 aaPredicted RBP17.97■□□□□ 0.47
PNN-202ENST00000553331 SLC35G2Q8TBE7 412 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 FAM71BQ8TC56 605 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 SCG3Q8WXD2 468 aaKnown RBP17.97■□□□□ 0.47
PNN-202ENST00000553331 FUBP1Q96AE4 644 aaKnown RBP17.97■□□□□ 0.47
PNN-202ENST00000553331 NUS1Q96E22 293 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 PDXPQ96GD0 296 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 TBATAQ96M53 351 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 CCDC42Q96M95 316 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 SEMA3CQ99985 751 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 BOCQ9BWV1 1114 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 SUDS3Q9H7L9 328 aaPredicted RBP17.97■□□□□ 0.47
PNN-202ENST00000553331 NHEJ1Q9H9Q4 299 aaPredicted RBP17.97■□□□□ 0.47
PNN-202ENST00000553331 MRPL40Q9NQ50 206 aaKnown RBP17.97■□□□□ 0.47
PNN-202ENST00000553331 PHTF1Q9UMS5 762 aa17.97■□□□□ 0.47
PNN-202ENST00000553331 A0A1W2PQ67 120 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 TMEM202A6NGA9 273 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 CYP2A6P11509 494 aaPredicted RBP17.96■□□□□ 0.47
PNN-202ENST00000553331 GM2AP17900 193 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 NFKBIAP25963 317 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 GALNT2Q10471 571 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 RTP5Q14D33 572 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 PAFAH1B3Q15102 231 aaKnown RBP17.96■□□□□ 0.47
PNN-202ENST00000553331 CDCP2Q5VXM1 449 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 PNCKQ6P2M8 343 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 GKN2Q86XP6 184 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 LRRC49Q8IUZ0 686 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 CACTIN-AS1Q8N1I8 211 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 PELI3Q8N2H9 469 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 OR1E3Q8WZA6 343 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 COQ10AQ96MF6 247 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 ZNF670Q9BS34 389 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 RBM22Q9NW64 420 aaKnown RBP eCLIP17.96■□□□□ 0.47
PNN-202ENST00000553331 PADI4Q9UM07 663 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 GPR34Q9UPC5 381 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 RAI2Q9Y5P3 530 aa17.96■□□□□ 0.47
PNN-202ENST00000553331 DMXL2Q8TDJ6 3036 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 URB1O60287 2271 aaKnown RBP17.95■□□□□ 0.46
PNN-202ENST00000553331 A0A0U1RQS6 177 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 EME2A4GXA9 379 aaPredicted RBP17.95■□□□□ 0.46
PNN-202ENST00000553331 NPIPB15A6NHN6 443 aaPredicted RBP17.95■□□□□ 0.46
PNN-202ENST00000553331 TLX3O43711 291 aaPredicted RBP17.95■□□□□ 0.46
PNN-202ENST00000553331 USP12O75317 370 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 HEXIM1O94992 359 aaKnown RBP17.95■□□□□ 0.46
PNN-202ENST00000553331 PGLSO95336 258 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 TNNT1P13805 278 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 ETV3P41162 512 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 KIAA1024LP59773 190 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 DSC2Q02487 901 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 GBE1Q04446 702 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 ARHGEF7Q14155 803 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 IFI16Q16666 785 aaKnown RBP17.95■□□□□ 0.46
PNN-202ENST00000553331 RALGPS1Q5JS13 557 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 TIGD7Q6NT04 549 aaPredicted RBP17.95■□□□□ 0.46
PNN-202ENST00000553331 HSD11B1LQ7Z5J1 315 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 TSPAN33Q86UF1 283 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 TEX26Q8N6G2 289 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 PQLC3Q8N755 202 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 KYQ8NBH2 561 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 CCNYQ8ND76 341 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 OR56A4Q8NGH8 313 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 RAPGEF5Q92565 580 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 LGR4Q9BXB1 951 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 POLR1EQ9GZS1 481 aaKnown RBP17.95■□□□□ 0.46
PNN-202ENST00000553331 WDR26Q9H7D7 661 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 LCMT1Q9UIC8 334 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 ASXL3Q9C0F0 2248 aa17.95■□□□□ 0.46
PNN-202ENST00000553331 CFAP47Q6ZTR5 3102 aa17.94■□□□□ 0.46
PNN-202ENST00000553331 ZFHX4Q86UP3 3567 aa17.94■□□□□ 0.46
PNN-202ENST00000553331 LRRD1A4D1F6 860 aa17.94■□□□□ 0.46
PNN-202ENST00000553331 MATN3O15232 486 aa17.94■□□□□ 0.46
PNN-202ENST00000553331 CASC3O15234 703 aaKnown RBP17.94■□□□□ 0.46
PNN-202ENST00000553331 MPOP05164 745 aa17.94■□□□□ 0.46
PNN-202ENST00000553331 PDHA1P08559 390 aa17.94■□□□□ 0.46
PNN-202ENST00000553331 LHCGRP22888 699 aa17.94■□□□□ 0.46
PNN-202ENST00000553331 KELP23276 732 aa17.94■□□□□ 0.46
PNN-202ENST00000553331 KDELR1P24390 212 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms