RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 A8MX80 341 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 ZNF487B1APH4 448 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 CACNB4O00305 520 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-207ENST00000553290 YY2O15391 372 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 PGLSO95336 258 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 MT-CO3P00414 261 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 HOXC4P09017 264 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-207ENST00000553290 ALPIP09923 528 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 MYF5P13349 255 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 TSHRP16473 764 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 GM2AP17900 193 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 KELP23276 732 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 KDELR1P24390 212 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 TRIM23P36406 574 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 RPIAP49247 311 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 KIAA1024LP59773 190 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 SRP54P61011 504 aaKnown RBP12.99□□□□□ -0.33
ACTN1-207ENST00000553290 ITKQ08881 620 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 TRAF2Q12933 501 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 TBX2Q13207 712 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-207ENST00000553290 NR0B2Q15466 257 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 ALG11Q2TAA5 492 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 C6orf132Q5T0Z8 1188 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 ALG1LQ6GMV1 187 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 ESRP1Q6NXG1 681 aaKnown RBP12.99□□□□□ -0.33
ACTN1-207ENST00000553290 LVRNQ6Q4G3 990 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 VSIG1Q86XK7 387 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 PQLC3Q8N755 202 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 PLA2G15Q8NCC3 412 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 IFI44Q8TCB0 444 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 SCG3Q8WXD2 468 aaKnown RBP12.99□□□□□ -0.33
ACTN1-207ENST00000553290 TSACCQ96A04 125 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-207ENST00000553290 SCRN2Q96FV2 425 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 COQ10AQ96MF6 247 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 RNF157Q96PX1 679 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 SEMA3CQ99985 751 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 TRIM5Q9C035 493 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 CLPBQ9H078 707 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 DOLKQ9UPQ8 538 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 PPIL1Q9Y3C6 166 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 CHD6Q8TD26 2715 aa12.99□□□□□ -0.33
ACTN1-207ENST00000553290 PKD1L2Q7Z442 2459 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 CPED1A4D0V7 1026 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 LRRD1A4D1F6 860 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 EME2A4GXA9 379 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-207ENST00000553290 PSMD11O00231 422 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 PDE2AO00408 941 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-207ENST00000553290 TNFRSF10CO14798 259 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 HEXIM1O94992 359 aaKnown RBP12.98□□□□□ -0.33
ACTN1-207ENST00000553290 MAP3K6O95382 1288 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 TNFP01375 233 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 CCNB1P14635 433 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 SLC1A1P43005 524 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 ARHGEF7Q14155 803 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 RTP5Q14D33 572 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 TCEAL1Q15170 157 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 CNGA3Q16281 694 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 CDKN3Q16667 212 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 LRRC38Q5VT99 294 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 CDCP2Q5VXM1 449 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 PNCKQ6P2M8 343 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 USP45Q70EL2 814 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 EFL1Q7Z2Z2 1120 aaKnown RBP12.98□□□□□ -0.33
ACTN1-207ENST00000553290 RD3Q7Z3Z2 195 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 GKN2Q86XP6 184 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 CBARPQ8N350 705 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-207ENST00000553290 OR56A4Q8NGH8 313 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 TPCN2Q8NHX9 752 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 MAPK15Q8TD08 544 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 PIH1D2Q8WWB5 315 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 RAPGEF5Q92565 580 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 NAT6Q93015 286 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 FUBP1Q96AE4 644 aaKnown RBP12.98□□□□□ -0.33
ACTN1-207ENST00000553290 HDAC11Q96DB2 347 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 NUS1Q96E22 293 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 ZNF830Q96NB3 372 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-207ENST00000553290 DEPDC7Q96QD5 511 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 MCCC1Q96RQ3 725 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-207ENST00000553290 WDR26Q9H7D7 661 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 RBM22Q9NW64 420 aaKnown RBP eCLIP12.98□□□□□ -0.331e-6■■□□□ 11.9
ACTN1-207ENST00000553290 DTLQ9NZJ0 730 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 RAI2Q9Y5P3 530 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 AK5Q9Y6K8 562 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 DGKBQ9Y6T7 804 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 LRP4O75096 1905 aa12.98□□□□□ -0.33
ACTN1-207ENST00000553290 APC2O95996 2303 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 FZD6O60353 706 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 CA4P22748 312 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 GBE1Q04446 702 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 SLC10A2Q12908 348 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-207ENST00000553290 ODF2Q5BJF6 829 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 DENND2CQ68D51 928 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 GUSBP11Q6P575 273 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 SLC35F3Q8IY50 421 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 CCDC13Q8IYE1 715 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 CCNYQ8ND76 341 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 WDR48Q8TAF3 677 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-207ENST00000553290 DTD2Q96FN9 168 aa12.97□□□□□ -0.33
ACTN1-207ENST00000553290 RBM15Q96T37 977 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms