RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CEPT1Q9Y6K0 416 aa5.91□□□□□ -1.46
SCFD1-208ENST00000553278 A0A096LPK6 155 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 HSPB2A8KAH6 182 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 KLRF2D3W0D1 207 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 RNMTO43148 476 aaKnown RBP5.9□□□□□ -1.46
SCFD1-208ENST00000553278 JRKO75564 520 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 LCKP06239 509 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 HLA-DPA1P20036 260 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 ANXA7P20073 488 aaKnown RBP5.9□□□□□ -1.46
SCFD1-208ENST00000553278 DRD4P21917 467 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 SHMT1P34896 483 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 GPR12P47775 334 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 AMPHP49418 695 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 ARSEP51690 589 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 BMXP51813 675 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 CAPZA1P52907 286 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 TAS2R40P59535 323 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 MORF4L2Q15014 288 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 HSPB2Q16082 182 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 PKN2Q16513 984 aaKnown RBP5.9□□□□□ -1.46
SCFD1-208ENST00000553278 SMU1Q2TAY7 513 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 CDONQ4KMG0 1287 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 SYTL3Q4VX76 610 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 RARS2Q5T160 578 aaKnown RBP5.9□□□□□ -1.46
SCFD1-208ENST00000553278 FBXO42Q6P3S6 717 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 LRIG3Q6UXM1 1119 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 RBM44Q6ZP01 1051 aaKnown RBP5.9□□□□□ -1.46
SCFD1-208ENST00000553278 MSANTD1Q6ZTZ1 278 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 C1orf210Q8IVY1 113 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 SIX6OS1Q8N1H7 587 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 LCORLQ8N3X6 602 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 SLC44A3Q8N4M1 653 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 CAMKVQ8NCB2 501 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 KCNE4Q8WWG9 221 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 HAS1Q92839 578 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 PTP4A1Q93096 173 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 LENG9Q96B70 501 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 FBXL8Q96CD0 374 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 RNF183Q96D59 192 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 TBC1D31Q96DN5 1066 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 RRNAD1Q96FB5 475 aaKnown RBP5.9□□□□□ -1.46
SCFD1-208ENST00000553278 SLITRK1Q96PX8 696 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 FCRL5Q96RD9 977 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 CDRT15Q96T59 188 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 SYT17Q9BSW7 474 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 FUT8Q9BYC5 575 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 MMP27Q9H306 513 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 MAGEE1Q9HCI5 957 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 COPG2Q9UBF2 871 aa5.9□□□□□ -1.46
SCFD1-208ENST00000553278 CRNNQ9UBG3 495 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-208ENST00000553278 DDX25Q9UHL0 483 aaKnown RBP5.9□□□□□ -1.46
SCFD1-208ENST00000553278 MAST3O60307 1309 aa5.9□□□□□ -1.47
SCFD1-208ENST00000553278 FNDC1Q4ZHG4 1894 aaPredicted RBP5.9□□□□□ -1.47
SCFD1-208ENST00000553278 CYP2D7A0A087X1C5 515 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 EDDM13A0A1B0GTR0 161 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 A0A1W2PR77 199 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 TCRBV5S1A1TA0A578 114 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 C19orf81C9J6K1 198 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 AKR1B15C9JRZ8 316 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-208ENST00000553278 UBE2Q2LH0YL09 131 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 H3BQ06 376 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-208ENST00000553278 RRHO14718 337 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 ATP2C2O75185 946 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 PEX11BO96011 259 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 ST6GAL1P15907 406 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 CTPS1P17812 591 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 TCEA1P23193 301 aaKnown RBP5.89□□□□□ -1.47
SCFD1-208ENST00000553278 TACR3P29371 465 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 CLCN5P51795 746 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 BPIFB3P59826 476 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 SORDQ00796 357 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 COASYQ13057 564 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 KLF10Q13118 480 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 ITGADQ13349 1161 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 SNAPC1Q16533 368 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 C2orf76Q3KRA6 126 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 KRTCAP3Q53RY4 240 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 LRIF1Q5T3J3 769 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 CEP85Q6P2H3 762 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 ALKBH5Q6P6C2 394 aaKnown RBP5.89□□□□□ -1.47
SCFD1-208ENST00000553278 GJC3Q8NFK1 279 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 OR14L1PQ8NHC6 308 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 HUS1BQ8NHY5 278 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 IL17DQ8TAD2 202 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 ACTRT2Q8TDY3 377 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 EXOC4Q96A65 974 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 NUDCD1Q96RS6 583 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 MGME1Q9BQP7 344 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 RTN4RQ9BZR6 473 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 SLC28A3Q9HAS3 691 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 ZNF304Q9HCX3 659 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 WDR6Q9NNW5 1121 aaKnown RBP5.89□□□□□ -1.47
SCFD1-208ENST00000553278 PAG1Q9NWQ8 432 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 HAO2Q9NYQ3 351 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 ODF2LQ9ULJ1 636 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 ABCC9O60706 1549 aa5.89□□□□□ -1.47
SCFD1-208ENST00000553278 DDTLA6NHG4 134 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-208ENST00000553278 DDX39AO00148 427 aaKnown RBP5.88□□□□□ -1.47
SCFD1-208ENST00000553278 RTCAO00442 366 aaKnown RBP5.88□□□□□ -1.47
SCFD1-208ENST00000553278 SLCO2B1O94956 709 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms