RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.87	□□□□□ -0.51
LETMD1-223	ENST00000550442	VWA7	Q9Y334	891 aa		11.87	□□□□□ -0.51
LETMD1-223	ENST00000550442	CEP250	Q9BV73	2442 aa		11.87	□□□□□ -0.51
LETMD1-223	ENST00000550442	DMXL1	Q9Y485	3027 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	SLC12A8	A0AV02	714 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	SLC38A8	A6NNN8	435 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	ZNF195	O14628	629 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	KDELR3	O43731	214 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	CCNT2	O60583	730 aa	Known RBP	11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	PEX11A	O75192	247 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	PMPCB	O75439	489 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	NDST3	O95803	873 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	GLP2R	O95838	553 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	MOCS2	O96007	188 aa	Predicted RBP	11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	PRKCG	P05129	697 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	GNAZ	P19086	355 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	TFEB	P19484	476 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	TACR2	P21452	398 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	VHL	P40337	213 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	MAPK8	P45983	427 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	ACTR3	P61158	418 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	RPL26	P61254	145 aa	Known RBP	11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	SLC34A1	Q06495	639 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	TUBB3	Q13509	450 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	POU6F1	Q14863	301 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	VEPH1	Q14D04	833 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	CCDC6	Q16204	474 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	ST3GAL2	Q16842	350 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	SPATS1	Q496A3	300 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	INO80D	Q53TQ3	878 aa	Predicted RBP	11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	PPM1J	Q5JR12	505 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	ESRP1	Q6NXG1	681 aa	Known RBP	11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	C16orf46	Q6P387	395 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	C16orf89	Q6UX73	402 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	C14orf80	Q86SX3	495 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	CILP2	Q8IUL8	1156 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	UBALD2	Q8IYN6	164 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	KIAA2013	Q8IYS2	634 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	TDRD5	Q8NAT2	981 aa	Known RBP	11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	CEP70	Q8NHQ1	597 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	SPATA22	Q8NHS9	363 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	ACTRT2	Q8TDY3	377 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	LRRN4	Q8WUT4	740 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	THOC1	Q96FV9	657 aa	Known RBP	11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	HMCES	Q96FZ2	354 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	UBXN10	Q96LJ8	280 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	MGME1	Q9BQP7	344 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	ADGRE3	Q9BY15	652 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	C12orf65	Q9H3J6	166 aa	Known RBP	11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	COG4	Q9H9E3	785 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	TCF7L2	Q9NQB0	619 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	CLEC1B	Q9P126	229 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	MCM8	Q9UJA3	840 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	STOML2	Q9UJZ1	356 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	TBC1D30	Q9Y2I9	924 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	ASB3	Q9Y575	518 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	MYO10	Q9HD67	2058 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	ATRX	P46100	2492 aa		11.86	□□□□□ -0.51
LETMD1-223	ENST00000550442	MAP1B	P46821	2468 aa	Known RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	TYW5	A2RUC4	315 aa	Known RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	MSI1	O43347	362 aa	Known RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	VPS4B	O75351	444 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	MT-CYB	P00156	380 aa	Predicted RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ACADS	P16219	412 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	TPH1	P17752	444 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	GLDC	P23378	1020 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ALDH1A3	P47895	512 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	GRIA4	P48058	902 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	SUOX	P51687	545 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ATP6V0D1	P61421	351 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	MXRA7	P84157	204 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	BTK	Q06187	659 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ITK	Q08881	620 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	SF3A3	Q12874	501 aa	Known RBP eCLIP	11.85	□□□□□ -0.51	1e-8	■□□□□ 9.9
LETMD1-223	ENST00000550442	ZNF177	Q13360	481 aa	Predicted RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	AARS2	Q5JTZ9	985 aa	Known RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ZNF470	Q6ECI4	717 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ASTL	Q6HA08	431 aa	Predicted RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	CES3	Q6UWW8	571 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	TMC7	Q7Z402	723 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	RAB44	Q7Z6P3	723 aa	Predicted RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	CMC1	Q7Z7K0	106 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ITIH5	Q86UX2	942 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	RNF168	Q8IYW5	571 aa	Predicted RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	FSTL5	Q8N475	847 aa	Predicted RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	TMEM151A	Q8N4L1	468 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ZNF557	Q8N988	423 aa	Predicted RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ATAD1	Q8NBU5	361 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ZNF461	Q8TAF7	563 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	ARRDC2	Q8TBH0	407 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	SCYL1	Q96KG9	808 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	CYP2S1	Q96SQ9	504 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	TRIM56	Q9BRZ2	755 aa	Known RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	GATA5	Q9BWX5	397 aa	Predicted RBP	11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	GPR62	Q9BZJ7	368 aa		11.85	□□□□□ -0.51
LETMD1-223	ENST00000550442	C20orf27	Q9GZN8	174 aa		11.85	□□□□□ -0.51

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