RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 CCDC3Q9BQI4 270 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 CNPY3Q9BT09 278 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.69□□□□□ -1.18
NEK3-201ENST00000550331 WRAP53Q9BUR4 548 aaKnown RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 MAGEB5Q9BZ81 275 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 TRIM4Q9C037 500 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 FAM117AQ9C073 453 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 CLPBQ9H078 707 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 TCEAL2Q9H3H9 227 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 MBNL1Q9NR56 388 aaKnown RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 LHX3Q9UBR4 397 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 IL17BQ9UHF5 180 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 PNMA8BQ9ULN7 279 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 PADI4Q9UM07 663 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 HEMK1Q9Y5R4 338 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 BSNQ9UPA5 3926 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 UBR5O95071 2799 aaPredicted RBP7.69□□□□□ -1.18
NEK3-201ENST00000550331 NBPF19A0A087WUL8 3843 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 KIF26BQ2KJY2 2108 aa7.69□□□□□ -1.18
NEK3-201ENST00000550331 USP9XQ93008 2570 aaPredicted RBP7.68□□□□□ -1.18
NEK3-201ENST00000550331 CCDC187A0A096LP49 1063 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 CFAP69A5D8W1 941 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 LGALS16A8MUM7 142 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 EIF3CLB5ME19 914 aaKnown RBP7.68□□□□□ -1.18
NEK3-201ENST00000550331 TMX2-CTNND1H3BSU7 103 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 NTN3O00634 580 aaPredicted RBP7.68□□□□□ -1.18
NEK3-201ENST00000550331 CCP110O43303 1012 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 RASGRP1O95267 797 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 ITGA2BP08514 1039 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 CTSEP14091 401 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 DESP17661 470 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 ITIH2P19823 946 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 HK3P52790 923 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 MTM1Q13496 603 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 NFATC4Q14934 902 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 CYTH1Q15438 398 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 ALG11Q2TAA5 492 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 WSCD2Q2TBF2 565 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 CFAP58Q5T655 872 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 KIAA1614Q5VZ46 1190 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 ERAP2Q6P179 960 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 SCYL2Q6P3W7 929 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 BRAT1Q6PJG6 821 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 CRTC1Q6UUV9 634 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 RBM43Q6ZSC3 357 aaKnown RBP7.68□□□□□ -1.18
NEK3-201ENST00000550331 PYROXD2Q8N2H3 581 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 ANKRD20A12PQ8NF67 263 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 NEK11Q8NG66 645 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 OR6C4Q8NGE1 309 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 LIN37Q96GY3 246 aaPredicted RBP7.68□□□□□ -1.18
NEK3-201ENST00000550331 EXOC2Q96KP1 924 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 MCEEQ96PE7 176 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 TUBGCP5Q96RT8 1024 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 EIF3CQ99613 913 aaKnown RBP7.68□□□□□ -1.18
NEK3-201ENST00000550331 EDEM3Q9BZQ6 932 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 KLC2Q9H0B6 622 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 SUV39H2Q9H5I1 410 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 LRRC19Q9H756 370 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 PDFQ9HBH1 243 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 FANCLQ9NW38 375 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 UBA2Q9UBT2 640 aaPredicted RBP7.68□□□□□ -1.18
NEK3-201ENST00000550331 FZD10Q9ULW2 581 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 DOLKQ9UPQ8 538 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 DGKBQ9Y6T7 804 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 UNC79Q9P2D8 2635 aa7.68□□□□□ -1.18
NEK3-201ENST00000550331 K7ENP7 123 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 PLD2O14939 933 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 INSIG1O15503 277 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 CREB3O43889 395 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 PRAMEF11O60813 436 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 TNFSF15O95150 251 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 PIGNO95427 931 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 NTRK1P04629 796 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 CCDC172P0C7W6 258 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 SERPINA4P29622 427 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 CCKBRP32239 447 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 MMP12P39900 470 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 CSNK1DP48730 415 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 LIG3P49916 1009 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 NDST2P52849 883 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 COPB1P53618 953 aaKnown RBP7.67□□□□□ -1.18
NEK3-201ENST00000550331 TPI1P60174 286 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 SRP54P61011 504 aaKnown RBP7.67□□□□□ -1.18
NEK3-201ENST00000550331 RPL7AP62424 266 aaKnown RBP7.67□□□□□ -1.18
NEK3-201ENST00000550331 NFATC3Q12968 1075 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 INPP5AQ14642 412 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 RFTN1Q14699 578 aaPredicted RBP7.67□□□□□ -1.18
NEK3-201ENST00000550331 COLEC12Q5KU26 742 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 PPP1R2P3Q6NXS1 205 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 INO80CQ6PI98 192 aaPredicted RBP7.67□□□□□ -1.18
NEK3-201ENST00000550331 ENPP7Q6UWV6 458 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 GKN2Q86XP6 184 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 HID1Q8IV36 788 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 KYQ8NBH2 561 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 PCDH19Q8TAB3 1148 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 PCMTD1Q96MG8 357 aaPredicted RBP7.67□□□□□ -1.18
NEK3-201ENST00000550331 WDR92Q96MX6 357 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 ERGIC2Q96RQ1 377 aa7.67□□□□□ -1.18
NEK3-201ENST00000550331 RBM15Q96T37 977 aaKnown RBP eCLIP7.67□□□□□ -1.18
NEK3-201ENST00000550331 AGPAT1Q99943 283 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms