RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CCDC157Q569K6 752 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 KAZNQ674X7 775 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 BZW1Q7L1Q6 419 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 PHACTR4Q8IZ21 702 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 RCOR2Q8IZ40 523 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 ATL2Q8NHH9 583 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 EXD1Q8NHP7 514 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 BTN2A2Q8WVV5 523 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 KRT35Q92764 455 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 NUS1Q96E22 293 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 SCRN2Q96FV2 425 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 TDRD1Q9BXT4 1180 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 LACRTQ9GZZ8 138 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 NLGN3Q9NZ94 848 aa17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 APOBEC3BQ9UH17 382 aaKnown RBP17.28■□□□□ 0.36
CHMP1A-208ENST00000550102 hCG_1818297A0A087WSY0 165 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 PSMD11O00231 422 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 TRIM38O00635 465 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 PJA2O43164 708 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 SIGLEC6O43699 453 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 FZD6O60353 706 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 LHCGRP22888 699 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 ACADVLP49748 655 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 RPL26P61254 145 aaKnown RBP17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 NIPAL4Q0D2K0 466 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 ARHGEF7Q14155 803 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 INPP5AQ14642 412 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 PRKD1Q15139 912 aaPredicted RBP17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 PPP2R5EQ16537 467 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 PROX2Q3B8N5 592 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 ARRDC2Q8TBH0 407 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 PIH1D2Q8WWB5 315 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 TBATAQ96M53 351 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 COQ10AQ96MF6 247 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 SLC13A1Q9BZW2 595 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 KCTD5Q9NXV2 234 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 SEPT10Q9P0V9 454 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 DNPEPQ9ULA0 475 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 RPL26L1Q9UNX3 145 aaKnown RBP17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 PPIL1Q9Y3C6 166 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 OR1A2Q9Y585 309 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 PCDHGA1Q9Y5H4 931 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 CSNK1G3Q9Y6M4 447 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 DUSP10Q9Y6W6 482 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 SPEGQ15772 3267 aa17.27■□□□□ 0.36
CHMP1A-208ENST00000550102 MYLKQ15746 1914 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 CAPN8A6NHC0 703 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 SCAMP1O15126 338 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 AQP9O43315 295 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 RFPL3O75679 317 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 PDHA1P08559 390 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 ALPIP09923 528 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 PECAM1P16284 738 aaPredicted RBP17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 CKMT2P17540 419 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 CTPS1P17812 591 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 GM2AP17900 193 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 CD86P42081 329 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 GSDMDP57764 484 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 KIAA1024LP59773 190 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 PPARDQ03181 441 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 DNAJC3Q13217 504 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 LLGL1Q15334 1064 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 DENND2CQ68D51 928 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 ESRP1Q6NXG1 681 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 RBFAQ8N0V3 343 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 PLA2G15Q8NCC3 412 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 KIAA1524Q8TCG1 905 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 TFB1MQ8WVM0 346 aaKnown RBP17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 P3H4Q92791 437 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 DTD2Q96FN9 168 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 DESI2Q9BSY9 194 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 APOOQ9BUR5 198 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 DUSP23Q9BVJ7 150 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 CEP41Q9BYV8 373 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 WDR26Q9H7D7 661 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 CAAP1Q9H8G2 361 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 PCDH9Q9HC56 1237 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 SPASTQ9UBP0 616 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 KLF15Q9UIH9 416 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 CHKBQ9Y259 395 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 MSRB2Q9Y3D2 182 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 SCN8AQ9UQD0 1980 aa17.26■□□□□ 0.35
CHMP1A-208ENST00000550102 A0A0J9YYE9 177 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 CCDC66A2RUB6 948 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 GRID2IPA4D2P6 1211 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 CACNB4O00305 520 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 MTSS1O43312 755 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 TRBC1P01850 177 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 C1SP09871 688 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 CDK4P11802 303 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 BLKP51451 505 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 COPS2P61201 443 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 DAB2P98082 770 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 KIF5AQ12840 1032 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 IHHQ14623 411 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 PRRT3Q5FWE3 981 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 FAXCQ5TGI0 409 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 BBS12Q6ZW61 710 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 HSD11B1LQ7Z5J1 315 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 TSPAN33Q86UF1 283 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms