RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 PIGNO95427 931 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 PCCBP05166 539 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 UNGP13051 313 aaPredicted RBP9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 GPD1P21695 349 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 HTR7P34969 479 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 GPR3P46089 330 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 NDST2P52849 883 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 MAPK10P53779 464 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 CYP4F2P78329 520 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 NSUN2Q08J23 767 aaKnown RBP eCLIP9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 BECN1Q14457 450 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 CLCA4Q14CN2 919 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 C16orf72Q14CZ0 275 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 TCEA2Q15560 299 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 CAMK4Q16566 473 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 EFHC2Q5JST6 749 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 PHF19Q5T6S3 580 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 SPECC1LQ69YQ0 1117 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 PNCKQ6P2M8 343 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 WDR59Q6PJI9 974 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 LIPIQ6XZB0 460 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 ZNF438Q7Z4V0 828 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 PHLDB2Q86SQ0 1253 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 VASH2Q86V25 355 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 ZSWIM9Q86XI8 627 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 CAMK1DQ8IU85 385 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 SFTPA2Q8IWL1 248 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 KIAA1524Q8TCG1 905 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 GPBAR1Q8TDU6 330 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 SLC20A1Q8WUM9 679 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 HTR3CQ8WXA8 447 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 NKD1Q969G9 470 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 EXOC2Q96KP1 924 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 TAAR9Q96RI9 348 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 CDH19Q9H159 772 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 FGF22Q9HCT0 170 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 MRPL40Q9NQ50 206 aaKnown RBP9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 AKAP7Q9P0M2 348 aaPredicted RBP9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 UBA2Q9UBT2 640 aaPredicted RBP9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 FZD10Q9ULW2 581 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 SDK2Q58EX2 2172 aa9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 TLN1Q9Y490 2541 aaKnown RBP9.89□□□□□ -0.83
TRAFD1-207ENST00000550051 STMND1H3BQB6 276 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 J3KR12 359 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 FGF10O15520 208 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 PRAMEF11O60813 436 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 FGF1P05230 155 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 FGF3P11487 239 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 CCL4P13236 92 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 CCNB1P14635 433 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 CD1CP29017 333 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 SERPINA4P29622 427 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 ZNF143P52747 638 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 RALGDSQ12967 914 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 TRA2AQ13595 282 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 CFAP58Q5T655 872 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 SRLQ86TD4 932 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 PHF13Q86YI8 300 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 CBARPQ8N350 705 aaPredicted RBP9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 CCL4L1Q8NHW4 92 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 C11orf70Q9BRQ4 267 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 SELENOOQ9BVL4 669 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 LGR4Q9BXB1 951 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 GANQ9H2C0 597 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 ATP13A3Q9H7F0 1226 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 CYP4F12Q9HCS2 524 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 SPATS2LQ9NUQ6 558 aaKnown RBP9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 TRNAU1APQ9NX07 287 aaKnown RBP9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 KCTD5Q9NXV2 234 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 ADAM22Q9P0K1 906 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 SEPT3Q9UH03 358 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 TUBD1Q9UJT1 453 aa9.88□□□□□ -0.83
TRAFD1-207ENST00000550051 COL12A1Q99715 3063 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 PTPN13Q12923 2485 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 IGHV5-10-1A0A0J9YXX1 117 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 TCRBV5S1A1TA0A578 114 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 PRSS38A1L453 326 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 RHPN2P1A8MT19 583 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 TRAFD1O14545 582 aaPredicted RBP9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 CREB3O43889 395 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 GFPT2O94808 682 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 FUCA1P04066 466 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 CALB1P05937 261 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 GM2AP17900 193 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 EEF1GP26641 437 aaKnown RBP9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 ALDH4A1P30038 563 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 SOX5P35711 763 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 ARSDP51689 593 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 LIMK2P53671 638 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 JAM2P57087 298 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 OR1D5P58170 312 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 UBE2HP62256 183 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 TLE1Q04724 770 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 PEX6Q13608 980 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 RFTN1Q14699 578 aaPredicted RBP9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 TCP11X2Q5H9J9 407 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 CT47A1Q5JQC4 288 aaPredicted RBP9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 SCYL2Q6P3W7 929 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 BORAQ6PGQ7 559 aa9.87□□□□□ -0.83
TRAFD1-207ENST00000550051 DPPA4Q7L190 304 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms