RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 CXorf56Q9H5V9 222 aa8.97□□□□□ -0.97
TMEM116-209ENST00000550020 CCSER2Q9H7U1 834 aa8.97□□□□□ -0.97
TMEM116-209ENST00000550020 ZBTB26Q9HCK0 441 aa8.97□□□□□ -0.97
TMEM116-209ENST00000550020 NMRK1Q9NWW6 199 aa8.97□□□□□ -0.97
TMEM116-209ENST00000550020 GEMIN8Q9NWZ8 242 aaKnown RBP8.97□□□□□ -0.97
TMEM116-209ENST00000550020 TAS2R13Q9NYV9 303 aa8.97□□□□□ -0.97
TMEM116-209ENST00000550020 ZDHHC2Q9UIJ5 367 aa8.97□□□□□ -0.97
TMEM116-209ENST00000550020 TBC1D30Q9Y2I9 924 aa8.97□□□□□ -0.97
TMEM116-209ENST00000550020 ZFP37Q9Y6Q3 630 aaPredicted RBP8.97□□□□□ -0.97
TMEM116-209ENST00000550020 PTPRDP23468 1912 aa8.97□□□□□ -0.97
TMEM116-209ENST00000550020 GOLGB1Q14789 3259 aaKnown RBP8.97□□□□□ -0.97
TMEM116-209ENST00000550020 ZNF840PA6NDX5 716 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 BBIP1A8MTZ0 92 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 MEI4A8MW99 385 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 AIM2O14862 343 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 UBDO15205 165 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 ZBTB14O43829 449 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 PEX1O43933 1283 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 VPS26AO75436 327 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 TRPA1O75762 1119 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 SOAT2O75908 522 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 BAG2O95816 211 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 GOT2P00505 430 aaKnown RBP8.96□□□□□ -0.98
TMEM116-209ENST00000550020 CXCL10P02778 98 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 ATF6P18850 670 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 CD9P21926 228 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 LPOP22079 712 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-209ENST00000550020 PSMA3P25788 255 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 EPHA3P29320 983 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 RFC2P35250 354 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 ACVRL1P37023 503 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 MAPK8P45983 427 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 TTPAP49638 278 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 STC1P52823 247 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 HERVK_113P63132 956 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 DLG1Q12959 904 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 IKBKEQ14164 716 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 PDCD2Q16342 344 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-209ENST00000550020 INO80DQ53TQ3 878 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-209ENST00000550020 RBM20Q5T481 1227 aaKnown RBP8.96□□□□□ -0.98
TMEM116-209ENST00000550020 GLT6D1Q7Z4J2 308 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 DHDDSQ86SQ9 333 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 CUZD1Q86UP6 607 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 ITIH5Q86UX2 942 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 RNF135Q8IUD6 432 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 MFSD6LQ8IWD5 586 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 GPR65Q8IYL9 337 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 CLYBLQ8N0X4 340 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 LSMEM2Q8N112 164 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 STK40Q8N2I9 435 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 PHTF2Q8N3S3 785 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 PGBD5Q8N414 524 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 CHCHD4Q8N4Q1 142 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 TTC9BQ8N6N2 239 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 POU5F2Q8N7G0 328 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 TXNDC5Q8NBS9 432 aaKnown RBP8.96□□□□□ -0.98
TMEM116-209ENST00000550020 ZNF461Q8TAF7 563 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 STAG3L4Q8TBR4 150 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 DTX3LQ8TDB6 740 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 SLC26A7Q8TE54 656 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 TOP1MTQ969P6 601 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 LENG8Q96PV6 779 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-209ENST00000550020 NDNQ99608 321 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 CCT7Q99832 543 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 SLC25A23Q9BV35 468 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 ERVK-6Q9BXR3 956 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 Q9H521 79 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 ZNF385DQ9H6B1 395 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 WDR55Q9H6Y2 383 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-209ENST00000550020 MEAF6Q9HAF1 191 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 MAN1C1Q9NR34 630 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 CREBZFQ9NS37 354 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 C6orf203Q9P0P8 240 aaPredicted RBP8.96□□□□□ -0.98
TMEM116-209ENST00000550020 SCOCQ9UIL1 159 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 AGO1Q9UL18 857 aaKnown RBP8.96□□□□□ -0.98
TMEM116-209ENST00000550020 POMPQ9Y244 141 aa8.96□□□□□ -0.98
TMEM116-209ENST00000550020 CXorf51AA0A1B0GTR3 108 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 CCDC162PA2VCL2 907 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 MAGEA13PA6NCF6 341 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 GIPC1O14908 333 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 COCHO43405 550 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 AOC2O75106 756 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 SRP72O76094 671 aaKnown RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 RHOBTB1O94844 696 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 SUPT7LO94864 414 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 CHEK2O96017 543 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 FGF4P08620 206 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 HSPA8P11142 646 aaKnown RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 ME2P23368 584 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 HOXD9P28356 352 aaPredicted RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 CORO1AP31146 461 aaKnown RBP8.95□□□□□ -0.98
TMEM116-209ENST00000550020 OR1D2P34982 312 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 ACADVLP49748 655 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 KCNQ1P51787 676 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 CLCN2P51788 898 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 EPHB3P54753 998 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 AP1S1P61966 158 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 SULT2A1Q06520 285 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 ZNF460Q14592 562 aa8.95□□□□□ -0.98
TMEM116-209ENST00000550020 MMEL1Q495T6 779 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms