RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ZSCAN30Q86W11 494 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 TMTC1Q8IUR5 882 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 LRRC49Q8IUZ0 686 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 SFTPA2Q8IWL1 248 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 PHACTR4Q8IZ21 702 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 CBARPQ8N350 705 aaPredicted RBP9.81□□□□□ -0.84
HDAC7-229ENST00000549883 OR4C6Q8NH72 309 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 LMX1AQ8TE12 382 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 NSMCE1Q8WV22 266 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 SPOCK2Q92563 424 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 HAUS1Q96CS2 278 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 APOLD1Q96LR9 279 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 IL12RB2Q99665 862 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 APOOQ9BUR5 198 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 LRRC61Q9BV99 259 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 POLR1EQ9GZS1 481 aaKnown RBP9.81□□□□□ -0.84
HDAC7-229ENST00000549883 C10orf88Q9H8K7 445 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 MRPL40Q9NQ50 206 aaKnown RBP9.81□□□□□ -0.84
HDAC7-229ENST00000549883 SEPT10Q9P0V9 454 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 LCMT1Q9UIC8 334 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 MSRB2Q9Y3D2 182 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 NEUROG3Q9Y4Z2 214 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 CEP295Q9C0D2 2601 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 hCG_1818297A0A087WSY0 165 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 A0A0A6YYK5 440 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 FAM221BA6H8Z2 402 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 TMEM202A6NGA9 273 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 ZNF487B1APH4 448 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 F5H423 210 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 CST8O60676 142 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 TRIM16O95361 564 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 FUCA1P04066 466 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 C1SP09871 688 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 CD86P42081 329 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 POLR2LP62875 67 aaKnown RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 IFI35P80217 286 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 SKOR1P84550 965 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 ZNF211Q13398 564 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 NFATC4Q14934 902 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 AGERQ15109 404 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 INAVAQ3KP66 663 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 PRRT3Q5FWE3 981 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 ARMC12Q5T9G4 340 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 FAXCQ5TGI0 409 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 TIGD7Q6NT04 549 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 C11orf63Q6NUN7 778 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 CRTC1Q6UUV9 634 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 ENPP7Q6UWV6 458 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 CCNI2Q6ZMN8 369 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 MACC1Q6ZN28 852 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 Q6ZVL8 140 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 TMPRSS7Q7RTY8 843 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 RD3Q7Z3Z2 195 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 DCP2Q8IU60 420 aaKnown RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 HID1Q8IV36 788 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 BBS5Q8N3I7 341 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 FAM174AQ8TBP5 190 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 OR1E3Q8WZA6 343 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 FATE1Q969F0 183 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 IFT43Q96FT9 208 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 PDXPQ96GD0 296 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 MCCC1Q96RQ3 725 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 BAG1Q99933 345 aaPredicted RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 C1QTNF7Q9BXJ2 289 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 HEMGNQ9BXL5 484 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 TDRD1Q9BXT4 1180 aaKnown RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 MAK16Q9BXY0 300 aaKnown RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 FGF22Q9HCT0 170 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 DDX56Q9NY93 547 aaKnown RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 CD84Q9UIB8 345 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 PHTF1Q9UMS5 762 aa9.8□□□□□ -0.84
HDAC7-229ENST00000549883 ZFC3H1O60293 1989 aaKnown RBP9.8□□□□□ -0.84
HDAC7-229ENST00000549883 SCN8AQ9UQD0 1980 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 USP24Q9UPU5 2620 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 GRID2IPA4D2P6 1211 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 CFAP69A5D8W1 941 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 AQP9O43315 295 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 PSTPIP1O43586 416 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 RFPL3O75679 317 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 CAPNS1P04632 268 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 TSHRP16473 764 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 CKMT2P17540 419 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 MX2P20592 715 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 CDC25BP30305 580 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 CD68P34810 354 aaPredicted RBP9.79□□□□□ -0.84
HDAC7-229ENST00000549883 SRP54P61011 504 aaKnown RBP9.79□□□□□ -0.84
HDAC7-229ENST00000549883 HNRNPKP61978 463 aaKnown RBP eCLIP9.79□□□□□ -0.84
HDAC7-229ENST00000549883 YPEL5P62699 121 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 PTSQ03393 145 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 MTM1Q13496 603 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 CAMK2BQ13554 666 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 PRKD1Q15139 912 aaPredicted RBP9.79□□□□□ -0.84
HDAC7-229ENST00000549883 SMAD1Q15797 465 aaKnown RBP9.79□□□□□ -0.84
HDAC7-229ENST00000549883 CDKN3Q16667 212 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 QPCTQ16769 361 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 ST3GAL2Q16842 350 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 RALGPS1Q5JS13 557 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 LRRC66Q68CR7 880 aa9.79□□□□□ -0.84
HDAC7-229ENST00000549883 PNCKQ6P2M8 343 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms