RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 DESP17661 470 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 TPH1P17752 444 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 CALB2P22676 271 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 SLC6A2P23975 617 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 MGAT1P26572 445 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 HOXA13P31271 388 aaPredicted RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 COPB2P35606 906 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 RPS19P39019 145 aaKnown RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 MAGEA4P43358 317 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 KCNJ1P48048 391 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 RARRES1P49788 294 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 HMGA2P52926 109 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 SLURP1P55000 103 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 YWHAEP62258 255 aaKnown RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 PPP2CBP62714 309 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 PPP2CAP67775 309 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 PIGFQ07326 219 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 TCP10Q12799 353 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 ARHGEF7Q14155 803 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 KCTD2Q14681 263 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 COG2Q14746 738 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 GRM7Q14831 915 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 MORF4L2Q15014 288 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 TMED2Q15363 201 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 SIX1Q15475 284 aaPredicted RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 TAF11Q15544 211 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 CCDC6Q16204 474 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 TAF12Q16514 161 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 PDK4Q16654 411 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 SLC45A4Q5BKX6 768 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 INTS11Q5TA45 600 aaKnown RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 C6orf163Q5TEZ5 329 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 LRRC38Q5VT99 294 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 CAPRIN2Q6IMN6 1127 aaKnown RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 VSTM1Q6UX27 236 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 C1orf122Q6ZSJ8 110 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 RFX8Q6ZV50 586 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 ASRGL1Q7L266 308 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 DOK3Q7L591 496 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 ANKS1BQ7Z6G8 1248 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 FAM228AQ86W67 206 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 ARHGEF19Q8IW93 802 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 GPR135Q8IZ08 494 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 MCOLN2Q8IZK6 566 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 GPD1LQ8N335 351 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 CERS5Q8N5B7 392 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 PPFIBP2Q8ND30 876 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 OLIG1Q8TAK6 271 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 AGAP11Q8TF27 550 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 SLC20A1Q8WUM9 679 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 PSPC1Q8WXF1 523 aaKnown RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 APBB2Q92870 758 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 ATP6V0A1Q93050 837 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 SAAL1Q96ER3 474 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 CDHR1Q96JP9 859 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 SNX27Q96L92 541 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 SORCS2Q96PQ0 1159 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 FAM167BQ9BTA0 163 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 TMEM120AQ9BXJ8 343 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 OSBPL8Q9BZF1 889 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 LRMDAQ9H2I8 198 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 DCLRE1BQ9H816 532 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 AGO3Q9H9G7 860 aaKnown RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 RNPEPL1Q9HAU8 725 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 SPATS2LQ9NUQ6 558 aaKnown RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 ABCF3Q9NUQ8 709 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 PARVAQ9NVD7 372 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 PSMC3IPQ9P2W1 217 aaPredicted RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 CNOT11Q9UKZ1 510 aaKnown RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 CORO1CQ9ULV4 474 aaPredicted RBP4.47□□□□□ -1.69
USP25-210ENST00000549362 AGAP1Q9UPQ3 857 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 SHOC2Q9UQ13 582 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 CDYLQ9Y232 598 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 STK38LQ9Y2H1 464 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 IKBKGQ9Y6K9 419 aa4.47□□□□□ -1.69
USP25-210ENST00000549362 IQANK1A0A1B0GTG1 560 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 LOC102723971A0A1B0GUV8 181 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 DDTLA6NHG4 134 aaPredicted RBP4.46□□□□□ -1.7
USP25-210ENST00000549362 A8MXQ7 604 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 MATN2O00339 956 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 TRAFD1O14545 582 aaPredicted RBP4.46□□□□□ -1.7
USP25-210ENST00000549362 IRAK2O43187 625 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 B4GALT3O60512 393 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 SNX2O60749 519 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 CCDC22O60826 627 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 EDF1O60869 148 aaKnown RBP4.46□□□□□ -1.7
USP25-210ENST00000549362 DIAPH2O60879 1101 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 RNASEH2AO75792 299 aaKnown RBP4.46□□□□□ -1.7
USP25-210ENST00000549362 ICAM1P05362 532 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 CYP2C9P11712 490 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 CKBP12277 381 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 UNGP13051 313 aaPredicted RBP4.46□□□□□ -1.7
USP25-210ENST00000549362 CHRNB2P17787 502 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 BTF3P20290 206 aaKnown RBP4.46□□□□□ -1.7
USP25-210ENST00000549362 CA4P22748 312 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 ACVR2AP27037 513 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 MARK3P27448 753 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 PTPN4P29074 926 aa4.46□□□□□ -1.7
USP25-210ENST00000549362 YWHABP31946 246 aaKnown RBP4.46□□□□□ -1.7
USP25-210ENST00000549362 GCKP35557 465 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms