RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 EIF2B3Q9NR50 452 aaKnown RBP4.26□□□□□ -1.73
PTCH1-216ENST00000548379 SLC6A13Q9NSD5 602 aa4.26□□□□□ -1.73
PTCH1-216ENST00000548379 TUBA8Q9NY65 449 aaPredicted RBP4.26□□□□□ -1.73
PTCH1-216ENST00000548379 HEY2Q9UBP5 337 aa4.26□□□□□ -1.73
PTCH1-216ENST00000548379 CTNNAL1Q9UBT7 734 aa4.26□□□□□ -1.73
PTCH1-216ENST00000548379 HAO1Q9UJM8 370 aa4.26□□□□□ -1.73
PTCH1-216ENST00000548379 VPS28Q9UK41 221 aa4.26□□□□□ -1.73
PTCH1-216ENST00000548379 CORO1CQ9ULV4 474 aaPredicted RBP4.26□□□□□ -1.73
PTCH1-216ENST00000548379 A3GALT2U3KPV4 340 aa4.26□□□□□ -1.73
PTCH1-216ENST00000548379 DAPK1P53355 1430 aa4.26□□□□□ -1.73
PTCH1-216ENST00000548379 RIMS2Q9UQ26 1411 aa4.26□□□□□ -1.73
PTCH1-216ENST00000548379 POLR1AO95602 1720 aaPredicted RBP4.26□□□□□ -1.73
PTCH1-216ENST00000548379 UTYO14607 1347 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 CDK12Q9NYV4 1490 aaPredicted RBP4.25□□□□□ -1.73
PTCH1-216ENST00000548379 EIF2AK4Q9P2K8 1649 aaKnown RBP4.25□□□□□ -1.73
PTCH1-216ENST00000548379 FAM237BA0A1B0GVD1 139 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 FAM90A8PA6NJQ4 464 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 A8MZ25 164 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 STMND1H3BQB6 276 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 FAM90A13PP0C7W8 464 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 FAM90A24PP0C7X0 464 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 CHRNB2P17787 502 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 TNFRSF1BP20333 461 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 GNLYP22749 145 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 NFKBIAP25963 317 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 NOS1P29475 1434 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 SHMT1P34896 483 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 RFC1P35251 1148 aaPredicted RBP4.25□□□□□ -1.73
PTCH1-216ENST00000548379 AVPR1AP37288 418 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 PSMB10P40306 273 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 HADHAP40939 763 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 GARSP41250 739 aaKnown RBP4.25□□□□□ -1.73
PTCH1-216ENST00000548379 PPP3CCP48454 512 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 SELENOVP59797 346 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 NANOS3P60323 173 aaKnown RBP4.25□□□□□ -1.73
PTCH1-216ENST00000548379 CEBPZQ03701 1054 aaKnown RBP4.25□□□□□ -1.73
PTCH1-216ENST00000548379 GAD2Q05329 585 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 NIPAL4Q0D2K0 466 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 LAMB3Q13751 1172 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 PPP2R5BQ15173 497 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 MED22Q15528 200 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 EZH2Q15910 746 aaKnown RBP4.25□□□□□ -1.73
PTCH1-216ENST00000548379 DUSP28Q4G0W2 176 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 ESCO2Q56NI9 601 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 SGO1Q5FBB7 561 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 MTX3Q5HYI7 312 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 PLEKHA7Q6IQ23 1121 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 LRRC8EQ6NSJ5 796 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 CCDC129Q6ZRS4 1044 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 NOXA1Q86UR1 476 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 CAMK1DQ8IU85 385 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 DNAJC10Q8IXB1 793 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 TTC39CQ8N584 583 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 WDTC1Q8N5D0 677 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 ARFGAP1Q8N6T3 406 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 GJC3Q8NFK1 279 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 PRSS3P2Q8NHM4 247 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 GTF3C6Q969F1 213 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 TMEM18Q96B42 140 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 MMABQ96EY8 250 aaPredicted RBP4.25□□□□□ -1.73
PTCH1-216ENST00000548379 LRRIQ1Q96JM4 1722 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 WDFY2Q96P53 400 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 TMEM79Q9BSE2 394 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 NPFFR1Q9GZQ6 430 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 TKTL2Q9H0I9 626 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 SYNCQ9H7C4 482 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 NRIP3Q9NQ35 241 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 PLK2Q9NYY3 685 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 ZNF70Q9UC06 446 aaPredicted RBP4.25□□□□□ -1.73
PTCH1-216ENST00000548379 COG5Q9UP83 839 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 MAST1Q9Y2H9 1570 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 FAM96BQ9Y3D0 163 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 MAP3K1Q13233 1512 aa4.25□□□□□ -1.73
PTCH1-216ENST00000548379 RPRD2Q5VT52 1461 aaKnown RBP4.24□□□□□ -1.73
PTCH1-216ENST00000548379 ANKRD50Q9ULJ7 1429 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 LY6G6EA0A0G2JKS1 128 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 FRMD3A2A2Y4 597 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 VILLO15195 856 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 SEC14L5O43304 696 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 FGBP02675 491 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 CYP19A1P11511 503 aaPredicted RBP4.24□□□□□ -1.73
PTCH1-216ENST00000548379 RARGP13631 454 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 PRF1P14222 555 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 CLCN5P51795 746 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 ADORA2A-AS1P86434 159 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 CREB5Q02930 508 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 CUL4AQ13619 759 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 RBMS2Q15434 407 aaKnown RBP4.24□□□□□ -1.73
PTCH1-216ENST00000548379 SOWAHAQ2M3V2 549 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 SOWAHCQ53LP3 525 aaPredicted RBP4.24□□□□□ -1.73
PTCH1-216ENST00000548379 CXorf66Q5JRM2 361 aaPredicted RBP4.24□□□□□ -1.73
PTCH1-216ENST00000548379 SARM1Q6SZW1 724 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 DLK2Q6UY11 383 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 SLC16A12Q6ZSM3 486 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 TDRPQ86YL5 185 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 MMP21Q8N119 569 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 PDILTQ8N807 584 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 SCFD2Q8WU76 684 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 INPP5DQ92835 1189 aa4.24□□□□□ -1.73
PTCH1-216ENST00000548379 SMARCE1Q969G3 411 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms