RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 A0A1B0GX30 115 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 LINC01553A4QN01 128 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 ZIC3O60481 467 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 CCNDBP1O95273 360 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 CLEC3BP05452 202 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 IGHV4-30-4P0DP06 118 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 ZNF12P17014 697 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 CD53P19397 219 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 STX2P32856 288 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 BNC1Q01954 994 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 TRAF3Q13114 568 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 KEAP1Q14145 624 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 FGFBP1Q14512 234 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 DRAP1Q14919 205 aaPredicted RBP4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 DPCR1Q3MIW9 517 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 C6orf141Q5SZD1 244 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 FAM69BQ5VUD6 431 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 TMTC3Q6ZXV5 915 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 SLC35F3Q8IY50 421 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 ZBTB2Q8N680 514 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 TDRD7Q8NHU6 1098 aaKnown RBP4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 MAGEC3Q8TD91 643 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 ADAMTS15Q8TE58 950 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 NUDCD2Q8WVJ2 157 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 PSPC1Q8WXF1 523 aaKnown RBP4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 HDAC2Q92769 488 aaKnown RBP4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 GTF3C6Q969F1 213 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 SMARCE1Q969G3 411 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 PABPC5Q96DU9 382 aaKnown RBP4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 ZHX3Q9H4I2 956 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 ESRP2Q9H6T0 727 aaKnown RBP4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 SLC6A13Q9NSD5 602 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 RCOR1Q9UKL0 485 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 CDC14AQ9UNH5 594 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 CEPT1Q9Y6K0 416 aa4.23□□□□□ -1.73
DEPDC4-205ENST00000548313 TGFB1I1O43294 461 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 DDX58O95786 925 aaKnown RBP4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 TBX18O95935 607 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 CD4P01730 458 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 SPARCP09486 303 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 DAOP14920 347 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 CHMP24386 653 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 TNFRSF8P28908 595 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 MAN1A1P33908 653 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 PIP4K2AP48426 406 aaPredicted RBP4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 METAP2P50579 478 aaKnown RBP eCLIP4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 TUBA1BP68363 451 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 OLR1P78380 273 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 KIF5AQ12840 1032 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 TMEM115Q12893 351 aaPredicted RBP4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 DCTN2Q13561 401 aaKnown RBP4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 NAE1Q13564 534 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 AMZ1Q400G9 498 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 KLHL22Q53GT1 634 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 NADSYN1Q6IA69 706 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 ANKRD54Q6NXT1 300 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 FAM122CQ6P4D5 195 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 FBXO46Q6PJ61 603 aaPredicted RBP4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 MEPCEQ7L2J0 689 aaKnown RBP4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 CPLX4Q7Z7G2 160 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 INTS12Q96CB8 462 aaKnown RBP4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 RTP4Q96DX8 246 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 MTBPQ96DY7 904 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 TMEM68Q96MH6 324 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 FIZ1Q96SL8 496 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 PIP5K1AQ99755 562 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 IFIH1Q9BYX4 1025 aaKnown RBP4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 OLA1Q9NTK5 396 aaKnown RBP4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 DLGAP2Q9P1A6 1054 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 SLCO3A1Q9UIG8 710 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 NFS1Q9Y697 457 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 CAPN7Q9Y6W3 813 aa4.22□□□□□ -1.73
DEPDC4-205ENST00000548313 ITIH6Q6UXX5 1313 aa4.21□□□□□ -1.73
DEPDC4-205ENST00000548313 IGLV5-37A0A075B6J1 123 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 AKR1B15C9JRZ8 316 aaPredicted RBP4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 ACOT8O14734 319 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 PAGE4O60829 102 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 SRCP12931 536 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 MAOAP21397 527 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 ICAM3P32942 547 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 COMPP49747 757 aaPredicted RBP4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 ART1P52961 327 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 SORDQ00796 357 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 EFNB3Q15768 340 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 TBCEQ15813 527 aaPredicted RBP4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 C2orf68Q2NKX9 166 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 ALG11Q2TAA5 492 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 MMEL1Q495T6 779 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 XKR9Q5GH70 373 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 GGNBP1Q5YKI7 109 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 KIAA1161Q6NSJ0 714 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 TSSK4Q6SA08 328 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 B3GNT6Q6ZMB0 384 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 CREB3L2Q70SY1 520 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 RSRC2Q7L4I2 434 aaKnown RBP4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 TAOK1Q7L7X3 1001 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 CNTROBQ8N137 903 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 SPATA6LQ8N4H0 392 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 WFIKKN2Q8TEU8 576 aa4.21□□□□□ -1.74
DEPDC4-205ENST00000548313 TMED6Q8WW62 240 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms