RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TMCO3Q6UWJ1 677 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 CYP4V2Q6ZWL3 525 aaPredicted RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 POLNQ7Z5Q5 900 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 SLC35F3Q8IY50 421 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 LZTR1Q8N653 840 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ATXN7L3BQ96GX2 97 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 NSMCE3Q96MG7 304 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 CSPG4P5Q96PW8 444 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 FUCA2Q9BTY2 467 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 LRRC61Q9BV99 259 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 BOCQ9BWV1 1114 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 THAP2Q9H0W7 228 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 SYNDIG1Q9H7V2 258 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 NOD2Q9HC29 1040 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ETNK2Q9NVF9 386 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 KLQ9UEF7 1012 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 SEPT3Q9UH03 358 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 MOSPD1Q9UJG1 213 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 PADI4Q9UM07 663 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 PCDHGC4Q9Y5F7 938 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 BZW2Q9Y6E2 419 aaKnown RBP6.74□□□□□ -1.33
SCAF11-211ENST00000547950 PLXNA2O75051 1894 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ZFYVE26Q68DK2 2539 aa6.74□□□□□ -1.33
SCAF11-211ENST00000547950 ITPR1Q14643 2758 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 A0A087X0T9 212 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 TMEM202A6NGA9 273 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 EIF4E1BA6NMX2 242 aaKnown RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 GOLGA6L19H0YKK7 550 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 MYO1FO00160 1098 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 CACNB4O00305 520 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 MAFKO60675 156 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 RASGRP1O95267 797 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 F12P00748 615 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 TNFP01375 233 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ALPIP09923 528 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ELFN1P0C7U0 828 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 FAM228BP0C875 321 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 RBMS1P29558 406 aaKnown RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 MMP12P39900 470 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 LSSP48449 732 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ZNF135P52742 658 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 MAXP61244 160 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 AP1S1P61966 158 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ZBED6P86452 979 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ITKQ08881 620 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 RALGDSQ12967 914 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 MTM1Q13496 603 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 PIGHQ14442 188 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 KRT81Q14533 505 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 NFATC4Q14934 902 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ELOCQ15369 112 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 DPYSL2Q16555 572 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 QPCTQ16769 361 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 TBC1D25Q3MII6 688 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 FIGNQ5HY92 759 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 C3orf38Q5JPI3 329 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 CCDC122Q5T0U0 273 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 TMCO4Q5TGY1 634 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 MARC1Q5VT66 337 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 HGSNATQ68CP4 663 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 KCTD16Q68DU8 428 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ALKBH5Q6P6C2 394 aaKnown RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 LIPIQ6XZB0 460 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 GKN2Q86XP6 184 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 LSMEM2Q8N112 164 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 FSTL5Q8N475 847 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 Q8N9G6 341 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 FAM46DQ8NEK8 389 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ATL2Q8NHH9 583 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 TPCN2Q8NHX9 752 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 NSMCE1Q8WV22 266 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 SYN2Q92777 582 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 FUBP1Q96AE4 644 aaKnown RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ECHDC3Q96DC8 303 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 WDR92Q96MX6 357 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ZNF599Q96NL3 588 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 PSKH2Q96QS6 385 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 CCDC3Q9BQI4 270 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 NUP85Q9BW27 656 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 SUDS3Q9H7L9 328 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 POLR1BQ9H9Y6 1135 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 SLC24A3Q9HC58 644 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 IFNKQ9P0W0 207 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 IP6K2Q9UHH9 426 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ANAPC7Q9UJX3 599 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 CAPN11Q9UMQ6 739 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 GPR34Q9UPC5 381 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 SATB2Q9UPW6 733 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 LUC7L2Q9Y383 392 aaKnown RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 CABIN1Q9Y6J0 2220 aa6.73□□□□□ -1.33
SCAF11-211ENST00000547950 ANKRD11Q6UB99 2663 aaPredicted RBP6.73□□□□□ -1.33
SCAF11-211ENST00000547950 FREM2Q5SZK8 3169 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 A0A1W2PQJ5 194 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 CFAP69A5D8W1 941 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 GOLGA6CA6NDK9 693 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 GOLGA6BA6NDN3 693 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 AGRPO00253 132 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms