RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 GMPRP36959 345 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SERPINB10P48595 397 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ARL4DP49703 201 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 GCNT1Q02742 428 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SNX17Q15036 470 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SURF1Q15526 300 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ADRM1Q16186 407 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 RGS21Q2M5E4 152 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 GOLGA7BQ2TAP0 167 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 KLHDC10Q6PID8 442 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 FOXR2Q6PJQ5 311 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SCIMPQ6UWF3 145 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 FKBP9P1Q75LS8 142 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 RIOX2Q8IUF8 465 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SYTL1Q8IYJ3 562 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ZNF276Q8N554 614 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 DHRSXQ8N5I4 330 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ZNF555Q8NEP9 628 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 DNAJB14Q8TBM8 379 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 NRG4Q8WWG1 115 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 HTRA1Q92743 480 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 HPDLQ96IR7 371 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 CELF6Q96J87 481 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 MAML3Q96JK9 1138 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 REXO4Q9GZR2 422 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 C6orf62Q9GZU0 229 aaPredicted RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 PCDHAC1Q9H158 963 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 RPAP3Q9H6T3 665 aaPredicted RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 PLGRKTQ9HBL7 147 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 NMRAL1Q9HBL8 299 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 XPNPEP3Q9NQH7 507 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 NOCTQ9UK39 431 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 FEM1BQ9UK73 627 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 DSEQ9UL01 958 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ACOT9Q9Y305 439 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SIGLEC16A6NMB1 481 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ERI2A8K979 691 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ZNF891A8MT65 544 aaPredicted RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 APOC4-APOC2K7ER74 178 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 VWA5AO00534 786 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ZSCAN9O15535 394 aaPredicted RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 LILRB5O75023 590 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SORBS2O94875 1100 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 TMEM63AO94886 807 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 KCNH1O95259 989 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 VAPBO95292 243 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 APOC2P02655 101 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 BPGMP07738 259 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 TXNP10599 105 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 EDNRBP24530 442 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ALDH4A1P30038 563 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 S100A5P33763 92 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SEPHS1P49903 392 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 NOMO3P69849 1222 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 CYP4F3Q08477 520 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 KLF10Q13118 480 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 NFYCQ13952 458 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 POLD3Q15054 466 aaPredicted RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 RBBP7Q16576 425 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 IMPG1Q17R60 797 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ARL13BQ3SXY8 428 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 ATG14Q6ZNE5 492 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SETD3Q86TU7 594 aaPredicted RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SCN4BQ8IWT1 228 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 MRPL41Q8IXM3 137 aaKnown RBP5.51□□□□□ -1.53
LIMA1-203ENST00000547825 BVESQ8NE79 360 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 IL31RAQ8NI17 732 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 CLEC4DQ8WXI8 215 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 TTC9Q92623 222 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 AZIN2Q96A70 460 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 LGMNQ99538 433 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 CNPY3Q9BT09 278 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 TIPINQ9BVW5 301 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 CRTAC1Q9NQ79 661 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 CNGB3Q9NQW8 809 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 LMCD1Q9NZU5 365 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 TRHDEQ9UKU6 1024 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 PSMD13Q9UNM6 376 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 SH3BP1Q9Y3L3 701 aa5.51□□□□□ -1.53
LIMA1-203ENST00000547825 E5RJQ4 531 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 M0QYT0 321 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 EEF2KO00418 725 aaKnown RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 ITM2AO43736 263 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 NRP2O60462 931 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CXCL8P10145 99 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PAMP19021 973 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CD247P20963 164 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 PIK3R1P27986 724 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 GP5P40197 560 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 YAP1P46937 504 aaKnown RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CLCN3P51790 818 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CDH13P55290 713 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 IL5RAQ01344 420 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 GNA12Q03113 381 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 BMT2Q1RMZ1 405 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 DENND5AQ6IQ26 1287 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 FAM117BQ6P1L5 589 aa5.5□□□□□ -1.53
LIMA1-203ENST00000547825 CHST15Q7LFX5 561 aaPredicted RBP5.5□□□□□ -1.53
LIMA1-203ENST00000547825 NXPE1Q8N323 547 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms