RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 TREX1Q9NSU2 369 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 GALPQ9UBC7 116 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 TSC2P49815 1807 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 EME2A4GXA9 379 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 STX7O15400 261 aaKnown RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 LDB2O43679 373 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 PRAMEF11O60813 436 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 NIPSNAP2O75323 286 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 KLHL2O95198 593 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 CDK7P50613 346 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 INSCQ1MX18 579 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 AGAP9Q5VTM2 703 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 TMEM207Q6UWW9 146 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 ZYG11AQ6WRX3 759 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 CLDN19Q8N6F1 224 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 OR9I1Q8NGQ6 314 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 OR4L1Q8NH43 312 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 APBB2Q92870 758 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 RSRC1Q96IZ7 334 aaKnown RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 ZNF558Q96NG5 402 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 TRIM8Q9BZR9 551 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 SEPT3Q9UH03 358 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 CLEC4EQ9ULY5 219 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 NYNRINQ9P2P1 1898 aaKnown RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 TMEM189-UBE2V1I3L0A0 370 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 CCL16O15467 120 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 SMAD6O43541 496 aaKnown RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 HOXD9P28356 352 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 KLF10Q13118 480 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 KIAA0930Q6ICG6 404 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 PAQR3Q6TCH7 311 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 ACAD11Q709F0 780 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 ZNF683Q8IZ20 524 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 NAT16Q8N8M0 369 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 PTGR2Q8N8N7 351 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 C2CD4AQ8NCU7 369 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 RCN3Q96D15 328 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 C1QTNF1Q9BXJ1 281 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 ZNF334Q9HCZ1 680 aaPredicted RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 CATSPERZQ9NTU4 200 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 ADA2Q9NZK5 511 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 AFF4Q9UHB7 1163 aaKnown RBP12.75□□□□□ -0.37
SCAF11-209ENST00000547018 CDYLQ9Y232 598 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 TIMM22Q9Y584 194 aa12.75□□□□□ -0.37
SCAF11-209ENST00000547018 CAPN14A8MX76 684 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 HDAC3O15379 428 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 HOXA2O43364 376 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 TMCC1O94876 653 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 ATXN1LP0C7T5 689 aaKnown RBP12.74□□□□□ -0.37
SCAF11-209ENST00000547018 HOXC13P31276 330 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 SLC20A2Q08357 652 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 CBX2Q14781 532 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-209ENST00000547018 ARHGEF6Q15052 776 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 PARP15Q460N3 678 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 FAM151BQ6UXP7 276 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 SLC39A5Q6ZMH5 540 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 GK5Q6ZS86 529 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 ARHGAP24Q8N264 748 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 TRPC4APQ8TEL6 797 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 CCDC97Q96F63 343 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-209ENST00000547018 CDKN2AIPNLQ96HQ2 116 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 HCFC1R1Q9NWW0 138 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 DONSONQ9NYP3 566 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 TRIOO75962 3097 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 E5RI56 91 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 TXNDC9O14530 226 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 TEX28O15482 410 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 GUCA1CO95843 209 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 S1PR4O95977 384 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 LTA4HP09960 611 aaKnown RBP12.74□□□□□ -0.37
SCAF11-209ENST00000547018 COX4I1P13073 169 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 HMGA1P17096 107 aaKnown RBP12.74□□□□□ -0.37
SCAF11-209ENST00000547018 CSKP41240 450 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 ZXDBP98169 803 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 CREB5Q02930 508 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 TBL3Q12788 808 aaKnown RBP12.74□□□□□ -0.37
SCAF11-209ENST00000547018 PREPLQ4J6C6 727 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-209ENST00000547018 PITRM1Q5JRX3 1037 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 MFN1Q8IWA4 741 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 PIANPQ8IYJ0 282 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 APCDD1Q8J025 514 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 CALML6Q8TD86 181 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 STYXQ8WUJ0 223 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 SCG3Q8WXD2 468 aaKnown RBP12.74□□□□□ -0.37
SCAF11-209ENST00000547018 PANX3Q96QZ0 392 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 CDRT15Q96T59 188 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 GPR21Q99679 349 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 PRKD2Q9BZL6 878 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 MKS1Q9NXB0 559 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 CFAP97Q9P2B7 532 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 MIA3Q5JRA6 1907 aa12.74□□□□□ -0.37
SCAF11-209ENST00000547018 A8MT66 165 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 AP3B1O00203 1094 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 INPPL1O15357 1258 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 PSMG1O95456 288 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 UGT1A6P19224 532 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 UGT1A1P22309 533 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 UGT1A4P22310 534 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 UGT1A3P35503 534 aa12.73□□□□□ -0.37
SCAF11-209ENST00000547018 UGT1A5P35504 534 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms