RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 COQ6Q9Y2Z9 468 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 COL5A1P20908 1838 aaPredicted RBP11.9□□□□□ -0.5
YBX3-217ENST00000546164 ANKRD36A6QL64 1941 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 A0A0J9YYE9 177 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 NPIPB15A6NHN6 443 aaPredicted RBP11.9□□□□□ -0.5
YBX3-217ENST00000546164 APOC4-APOC2K7ER74 178 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 ARHGAP6O43182 974 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 MTSS1O43312 755 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 PRLP01236 227 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 TRBC1P01850 177 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 APOC2P02655 101 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 HOXC4P09017 264 aaPredicted RBP11.9□□□□□ -0.5
YBX3-217ENST00000546164 LHCGRP22888 699 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 DGKAP23743 735 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 THOP1P52888 689 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 RWDD2BP57060 319 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 SKOR1P84550 965 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 EIF2B5Q13144 721 aaKnown RBP11.9□□□□□ -0.5
YBX3-217ENST00000546164 TEX44Q53QW1 395 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 KAZNQ674X7 775 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 ESRP1Q6NXG1 681 aaKnown RBP11.9□□□□□ -0.5
YBX3-217ENST00000546164 KDM7AQ6ZMT4 941 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 NT5DC3Q86UY8 548 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 CCDC50Q8IVM0 306 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 SPNS2Q8IVW8 549 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 RAVER1Q8IY67 606 aaKnown RBP11.9□□□□□ -0.5
YBX3-217ENST00000546164 SLC25A45Q8N413 288 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 RNF10Q8N5U6 811 aaKnown RBP11.9□□□□□ -0.5
YBX3-217ENST00000546164 TFB1MQ8WVM0 346 aaKnown RBP11.9□□□□□ -0.5
YBX3-217ENST00000546164 ADAMTS14Q8WXS8 1223 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 TADA1Q96BN2 335 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 LYSMD1Q96S90 227 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 SLC25A51Q9H1U9 297 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 DNAJC28Q9NX36 388 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 SAE1Q9UBE0 346 aaPredicted RBP11.9□□□□□ -0.5
YBX3-217ENST00000546164 TRIM10Q9UDY6 481 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 FTSJ1Q9UET6 329 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 DNPEPQ9ULA0 475 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 APOBEC2Q9Y235 224 aaKnown RBP11.9□□□□□ -0.5
YBX3-217ENST00000546164 TTLL3Q9Y4R7 772 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 ADGRG1Q9Y653 693 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 CSNK1G3Q9Y6M4 447 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 EPG5Q9HCE0 2579 aa11.9□□□□□ -0.5
YBX3-217ENST00000546164 A0A0U1RQJ8 604 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 MACROD2A1Z1Q3 448 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 CAPN8A6NHC0 703 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 MIF4GDA9UHW6 222 aaKnown RBP11.89□□□□□ -0.51
YBX3-217ENST00000546164 HACD1B0YJ81 288 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 H3BM21 787 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 SDC3O75056 442 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 GIMD1P0DJR0 217 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 ZNF30P17039 623 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 PTPN3P26045 913 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 TEAD1P28347 426 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 HNF1BP35680 557 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 TRIM23P36406 574 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 CD86P42081 329 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 WASHC5Q12768 1159 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 FOXC1Q12948 553 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 ZNF211Q13398 564 aaPredicted RBP11.89□□□□□ -0.51
YBX3-217ENST00000546164 XRCC4Q13426 336 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 INPP5AQ14642 412 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 NFATC4Q14934 902 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 ACOX1Q15067 660 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 LLGL1Q15334 1064 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 PEX26Q7Z412 305 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 RAB44Q7Z6P3 723 aaPredicted RBP11.89□□□□□ -0.51
YBX3-217ENST00000546164 SLCO6A1Q86UG4 719 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 EID2Q8N6I1 236 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 OR4C6Q8NH72 309 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 BTN2A2Q8WVV5 523 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 ALG3Q92685 438 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 DTD2Q96FN9 168 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 IMP4Q96G21 291 aaKnown RBP11.89□□□□□ -0.51
YBX3-217ENST00000546164 TEKT5Q96M29 485 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 QKIQ96PU8 341 aaKnown RBP eCLIP11.89□□□□□ -0.51
YBX3-217ENST00000546164 TRIB3Q96RU7 358 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 VAT1Q99536 393 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 APOOQ9BUR5 198 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 OSBPL8Q9BZF1 889 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 TSGA10Q9BZW7 698 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 PCDH9Q9HC56 1237 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 KLF15Q9UIH9 416 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 AMFRQ9UKV5 643 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 PCDHGA1Q9Y5H4 931 aa11.89□□□□□ -0.51
YBX3-217ENST00000546164 LRRK1Q38SD2 2015 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 FAM221BA6H8Z2 402 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 NEMP2A6NFY4 417 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 A8MX80 341 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 ENC1O14682 589 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 SCAMP1O15126 338 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 LDOC1O95751 146 aaPredicted RBP11.88□□□□□ -0.51
YBX3-217ENST00000546164 PCCBP05166 539 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 C1SP09871 688 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 ALPIP09923 528 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 ATXN1LP0C7T5 689 aaKnown RBP11.88□□□□□ -0.51
YBX3-217ENST00000546164 JUNDP17535 347 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 CTPS1P17812 591 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 HTR1BP28222 390 aa11.88□□□□□ -0.51
YBX3-217ENST00000546164 CETN2P41208 172 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms