RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 ZNF678Q5SXM1 525 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 GPR158Q5T848 1215 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 PIK3R6Q5UE93 754 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 GALNT7Q86SF2 657 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 RETREG3Q86VR2 466 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 SLC22A9Q8IVM8 553 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 AFAP1L2Q8N4X5 818 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 GRIN3AQ8TCU5 1115 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 HASPINQ8TF76 798 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 PTERQ96BW5 349 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 HIC2Q96JB3 615 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 ZNF512Q96ME7 567 aaPredicted RBP15.33■□□□□ 0.04
CNN3-207ENST00000545882 SLC39A3Q9BRY0 314 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 SLC25A23Q9BV35 468 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 ALG9Q9H6U8 611 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 NT5MQ9NPB1 228 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 MARCH4Q9P2E8 410 aaPredicted RBP15.33■□□□□ 0.04
CNN3-207ENST00000545882 TRPV2Q9Y5S1 764 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 CEPT1Q9Y6K0 416 aa15.33■□□□□ 0.04
CNN3-207ENST00000545882 MROH6A6NGR9 719 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 OR51F1A6NGY5 319 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 J3KR12 359 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 TRPA1O75762 1119 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 SRP72O76094 671 aaKnown RBP15.32■□□□□ 0.04
CNN3-207ENST00000545882 CHRNA1P02708 482 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 PCSK6P29122 969 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 CD86P42081 329 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 ATP4BP51164 291 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 MLLT6P55198 1093 aaPredicted RBP15.32■□□□□ 0.04
CNN3-207ENST00000545882 TIAL1Q01085 375 aaKnown RBP eCLIP15.32■□□□□ 0.044e-7■□□□□ 8
CNN3-207ENST00000545882 NRG1Q02297 640 aaPredicted RBP15.32■□□□□ 0.04
CNN3-207ENST00000545882 SLC10A7Q0GE19 358 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 KLC3Q6P597 504 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 MRPL10Q7Z7H8 261 aaKnown RBP15.32■□□□□ 0.04
CNN3-207ENST00000545882 PIM3Q86V86 326 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 TSPAN17Q96FV3 270 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 LRCH3Q96II8 777 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 KLHL5Q96PQ7 755 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 TRIM62Q9BVG3 475 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 MRGBPQ9NV56 204 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 POLR3BQ9NW08 1133 aaPredicted RBP15.32■□□□□ 0.04
CNN3-207ENST00000545882 DUS2Q9NX74 493 aaKnown RBP15.32■□□□□ 0.04
CNN3-207ENST00000545882 ATXN10Q9UBB4 475 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 KCTD3Q9Y597 815 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 SNX13Q9Y5W8 968 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 SCN10AQ9Y5Y9 1956 aa15.32■□□□□ 0.04
CNN3-207ENST00000545882 M0QZQ0 153 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 PDLIM1O00151 329 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 B3GAT3O94766 335 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 PAPSS2O95340 614 aaPredicted RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 POMCP01189 267 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 ATP6V1B2P21281 511 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 SLC5A2P31639 672 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 SLC7A2P52569 658 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 DSC2Q02487 901 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 TAF2Q6P1X5 1199 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 METTL23Q86XA0 190 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 ZNF683Q8IZ20 524 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 NUP93Q8N1F7 819 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 MYO1HQ8N1T3 1032 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 EZH1Q92800 747 aaPredicted RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 HDAC10Q969S8 669 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 GPATCH1Q9BRR8 931 aaKnown RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 OSBPL11Q9BXB4 747 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 NOL11Q9H8H0 719 aaKnown RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 MAP10Q9P2G4 905 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 ZFC3H1O60293 1989 aaKnown RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 A0A1W2PQH9 124 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 MYADML2A6NDP7 307 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 CCDC160A6NGH7 325 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 ZNF839A8K0R7 811 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 F8W810 466 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 PPP6CO00743 305 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 SLC7A4O43246 635 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 SUPT7LO94864 414 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 PENKP01210 267 aaPredicted RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 ITGB1P05556 798 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 CTSHP09668 335 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 HAPLN1P10915 354 aaPredicted RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 NELFEP18615 380 aaKnown RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 ACADVLP49748 655 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 FSCN1Q16658 493 aaKnown RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 SAMD4BQ5PRF9 694 aaKnown RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 ZNF549Q6P9A3 640 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 LRRC49Q8IUZ0 686 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 HMCESQ96FZ2 354 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 CIB1Q99828 191 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 TRMOQ9BU70 441 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 AP5M1Q9H0R1 490 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 MFSD1Q9H3U5 465 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 AKTIPQ9H8T0 292 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 AGO3Q9H9G7 860 aaKnown RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 OLAHQ9NV23 265 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 DDX18Q9NVP1 670 aaKnown RBP15.31■□□□□ 0.04
CNN3-207ENST00000545882 GIMAP2Q9UG22 337 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 PTGDR2Q9Y5Y4 395 aa15.31■□□□□ 0.04
CNN3-207ENST00000545882 ARHGEF37A1IGU5 675 aa15.3■□□□□ 0.04
CNN3-207ENST00000545882 H3BNH8 94 aa15.3■□□□□ 0.04
CNN3-207ENST00000545882 HTRA2O43464 458 aaPredicted RBP15.3■□□□□ 0.04
CNN3-207ENST00000545882 MGEA5O60502 916 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms