RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 SETDB1Q15047 1291 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 CNGA3Q16281 694 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 CCDC153Q494R4 210 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 MPPE1Q53F39 396 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 SIRPB2Q5JXA9 342 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 MPP7Q5T2T1 576 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 TSTD2Q5T7W7 516 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 ZNF470Q6ECI4 717 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 FSTL4Q6MZW2 842 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 CXorf57Q6NSI4 855 aaKnown RBP7.08□□□□□ -1.28
SPPL3-209ENST00000545209 NEPROQ6NW34 567 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 ESRP1Q6NXG1 681 aaKnown RBP7.08□□□□□ -1.28
SPPL3-209ENST00000545209 C6orf89Q6UWU4 347 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 C20orf204Q6ZNR8 217 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 GAREM2Q75VX8 874 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 TRPM8Q7Z2W7 1104 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 ALYREFQ86V81 257 aaKnown RBP7.08□□□□□ -1.28
SPPL3-209ENST00000545209 ZC3HC1Q86WB0 502 aaKnown RBP7.08□□□□□ -1.28
SPPL3-209ENST00000545209 TMC8Q8IU68 726 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 NUDCD3Q8IVD9 361 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 MFN1Q8IWA4 741 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 FAM217AQ8IXS0 508 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 LMNTD2Q8IXW0 634 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 PGBD5Q8N414 524 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 CPXM2Q8N436 756 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 MAB21L3Q8N8X9 362 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 MRPL43Q8N983 215 aaKnown RBP7.08□□□□□ -1.28
SPPL3-209ENST00000545209 DCAF4L2Q8NA75 395 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 TDRD5Q8NAT2 981 aaKnown RBP7.08□□□□□ -1.28
SPPL3-209ENST00000545209 LEMD2Q8NC56 503 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 TTC16Q8NEE8 873 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 ZNF417Q8TAU3 575 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 ZNF398Q8TD17 642 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 MICAL1Q8TDZ2 1067 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 ATXN7L3BQ96GX2 97 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 VPS39Q96JC1 886 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 ZNF587Q96SQ5 575 aaPredicted RBP7.08□□□□□ -1.28
SPPL3-209ENST00000545209 CYP2S1Q96SQ9 504 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 AGAP2Q99490 1192 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 GPR22Q99680 433 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 CORO1BQ9BR76 489 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 ACE2Q9BYF1 805 aaPredicted RBP7.08□□□□□ -1.28
SPPL3-209ENST00000545209 TRIM55Q9BYV6 548 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 ACTR5Q9H9F9 607 aaPredicted RBP7.08□□□□□ -1.28
SPPL3-209ENST00000545209 PRDM6Q9NQX0 595 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 TREX1Q9NSU2 369 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 NOP53Q9NZM5 478 aaKnown RBP7.08□□□□□ -1.28
SPPL3-209ENST00000545209 CFAP97Q9P2B7 532 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 DPP7Q9UHL4 492 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 TLK1Q9UKI8 766 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 KIAA1671Q9BY89 1806 aa7.08□□□□□ -1.28
SPPL3-209ENST00000545209 A0A096LPK6 155 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 MROH6A6NGR9 719 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 GOLGA8TH3BQL2 631 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 MUSKO15146 869 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 CCL16O15467 120 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 INSIG1O15503 277 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 PLIN3O60664 434 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 H2AFYO75367 372 aaKnown RBP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 DCTN3O75935 186 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 TMCC1O94876 653 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 CRTAMO95727 393 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 RB1P06400 928 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 BPGMP07738 259 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 HNRNPA1P09651 372 aaKnown RBP eCLIP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 ATXN1LP0C7T5 689 aaKnown RBP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 HOXB8P17481 243 aaPredicted RBP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 BGNP21810 368 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 CRABP2P29373 138 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 HOXA9P31269 272 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 AVPR1AP37288 418 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 MAGEA12P43365 314 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 MAPK8P45983 427 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 ARCN1P48444 511 aaKnown RBP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 SCNN1BP51168 640 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 SGSHP51688 502 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 CLCN5P51795 746 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 NSUN2Q08J23 767 aaKnown RBP eCLIP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 SF3A3Q12874 501 aaKnown RBP eCLIP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 USP10Q14694 798 aaKnown RBP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 CHI3L2Q15782 390 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 INO80DQ53TQ3 878 aaPredicted RBP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 RALGPS1Q5JS13 557 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 N4BP2L1Q5TBK1 243 aaPredicted RBP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 RNF43Q68DV7 783 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 PDE12Q6L8Q7 609 aaKnown RBP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 RETSATQ6NUM9 610 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 CDHR3Q6ZTQ4 885 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 RAPH1Q70E73 1250 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 HTR3DQ70Z44 454 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 OTOAQ7RTW8 1153 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 GALNT7Q86SF2 657 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 ZNF557Q8N988 423 aaPredicted RBP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 C2CD4AQ8NCU7 369 aaPredicted RBP7.07□□□□□ -1.28
SPPL3-209ENST00000545209 OR52K2Q8NGK3 314 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 OR6P1Q8NGX9 317 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 BRSK1Q8TDC3 778 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 BLOC1S5Q8TDH9 187 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 DDI1Q8WTU0 396 aa7.07□□□□□ -1.28
SPPL3-209ENST00000545209 POF1BQ8WVV4 589 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms