RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PRDM8Q9NQV8 689 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 TMEM248Q9NWD8 314 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 RMND1Q9NWS8 449 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 LHX3Q9UBR4 397 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 MOSPD1Q9UJG1 213 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 OTOGQ6ZRI0 2925 aa9.43□□□□□ -0.9
CHD4-212ENST00000545083 PRSS38A1L453 326 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 TNFRSF10CO14798 259 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 BUB1O43683 1085 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 KDELR3O43731 214 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 BUB1BO60566 1050 aaPredicted RBP9.42□□□□□ -0.9
CHD4-212ENST00000545083 VPS4BO75351 444 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 RECQL5O94762 991 aaPredicted RBP9.42□□□□□ -0.9
CHD4-212ENST00000545083 CLDN1O95832 211 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 IGSF6O95976 241 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 FURINP09958 794 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 PNMA6AP0CW24 399 aaPredicted RBP9.42□□□□□ -0.9
CHD4-212ENST00000545083 RHOQP17081 205 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 TCN2P20062 427 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 MAP4P27816 1152 aaKnown RBP9.42□□□□□ -0.9
CHD4-212ENST00000545083 TRIM23P36406 574 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 ETFBP38117 255 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 MAPKAPK2P49137 400 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 SUOXP51687 545 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 RAB15P59190 212 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 RHOAP61586 193 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 RAD51Q06609 339 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 ABHD18Q0P651 414 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 RALGDSQ12967 914 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 C2CD6Q53TS8 623 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 FAM102AQ5T9C2 384 aaPredicted RBP9.42□□□□□ -0.9
CHD4-212ENST00000545083 RWDD4Q6NW29 188 aaKnown RBP9.42□□□□□ -0.9
CHD4-212ENST00000545083 ASB18Q6ZVZ8 466 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 TICAM1Q8IUC6 712 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 CCDC13Q8IYE1 715 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 NAGSQ8N159 534 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 SHC3Q92529 594 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 KIAA1143Q96AT1 154 aaPredicted RBP9.42□□□□□ -0.9
CHD4-212ENST00000545083 RNF31Q96EP0 1072 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 CFAP57Q96MR6 1250 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 GSDMAQ96QA5 445 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 CRACR2AQ9BSW2 395 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 MAGEH1Q9H213 219 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 NOL6Q9H6R4 1146 aaKnown RBP9.42□□□□□ -0.9
CHD4-212ENST00000545083 TAAR2Q9P1P5 351 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 AJAP1Q9UKB5 411 aaPredicted RBP9.42□□□□□ -0.9
CHD4-212ENST00000545083 VPS4AQ9UN37 437 aa9.42□□□□□ -0.9
CHD4-212ENST00000545083 TMEM184BQ9Y519 407 aaPredicted RBP9.42□□□□□ -0.9
CHD4-212ENST00000545083 SHANK1Q9Y566 2161 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 TTLL8A6PVC2 850 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 A8MU76 341 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 MKRN2OSH3BPM6 223 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 RAMP2O60895 175 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 STK17BO94768 372 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 LRIG2O94898 1065 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 DLGAP3O95886 979 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 HOXC4P09017 264 aaPredicted RBP9.41□□□□□ -0.9
CHD4-212ENST00000545083 SLC9A1P19634 815 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 KELP23276 732 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 TNFRSF8P28908 595 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 STAT1P42224 750 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 GPR3P46089 330 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 GABRB2P47870 512 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 MC2RQ01718 297 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 NRG1Q02297 640 aaPredicted RBP9.41□□□□□ -0.9
CHD4-212ENST00000545083 SQSTM1Q13501 440 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 CYTH1Q15438 398 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 CRTC2Q53ET0 693 aaPredicted RBP9.41□□□□□ -0.9
CHD4-212ENST00000545083 ISM2Q6H9L7 571 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 TMEM71Q6P5X7 295 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 TRIM65Q6PJ69 517 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 SLC30A9Q6PML9 568 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 ENOSF1Q7L5Y1 443 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 KDELC2Q7Z4H8 507 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 TMEM135Q86UB9 458 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 SLC47A2Q86VL8 602 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 HEATR4Q86WZ0 1026 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 ZNF761Q86XN6 746 aaPredicted RBP9.41□□□□□ -0.9
CHD4-212ENST00000545083 XYLT1Q86Y38 959 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 ZDHHC17Q8IUH5 632 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 CPT1CQ8TCG5 803 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 EFHD1Q9BUP0 239 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 SUV39H2Q9H5I1 410 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 CARS2Q9HA77 564 aaKnown RBP9.41□□□□□ -0.9
CHD4-212ENST00000545083 PDP2Q9P2J9 529 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 OR12D3Q9UGF7 316 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 TMEM59LQ9UK28 342 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 TLK1Q9UKI8 766 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 HPCAL4Q9UM19 191 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 ATP8A1Q9Y2Q0 1164 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 ZDHHC9Q9Y397 364 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 ZFHX3Q15911 3703 aa9.41□□□□□ -0.9
CHD4-212ENST00000545083 GOLGA8SH3BPF8 625 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 PSMA7O14818 248 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 TEX33O43247 280 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 ADRA1BP35368 520 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 CLCN1P35523 988 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 KRT9P35527 623 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 SCNN1AP37088 669 aa9.4□□□□□ -0.9
CHD4-212ENST00000545083 STAT5AP42229 794 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms