RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 TGM2P21980 687 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 ACP1P24666 158 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 CETN2P41208 172 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 EPHB1P54762 984 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 MAXP61244 160 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 IFI35P80217 286 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-216ENST00000544989 E2F1Q01094 437 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 PPARDQ03181 441 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 GBE1Q04446 702 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 RALGDSQ12967 914 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 NFATC4Q14934 902 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 ACOX1Q15067 660 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 ELOCQ15369 112 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 SMAD1Q15797 465 aaKnown RBP11.85□□□□□ -0.51
HDAC4-216ENST00000544989 WSCD2Q2TBF2 565 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 PROX2Q3B8N5 592 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 UNQ6494/PRO21346Q6UXR6 183 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 DAAM2Q86T65 1068 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 TMPRSS12Q86WS5 348 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 CPNE8Q86YQ8 564 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 KATNAL2Q8IYT4 538 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 SLC25A45Q8N413 288 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 FSTL5Q8N475 847 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-216ENST00000544989 ZNF548Q8NEK5 533 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-216ENST00000544989 SCG3Q8WXD2 468 aaKnown RBP11.85□□□□□ -0.51
HDAC4-216ENST00000544989 MCCC1Q96RQ3 725 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-216ENST00000544989 BAG1Q99933 345 aaPredicted RBP11.85□□□□□ -0.51
HDAC4-216ENST00000544989 APOOQ9BUR5 198 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 B4GALT6Q9UBX8 382 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 APOBEC3BQ9UH17 382 aaKnown RBP11.85□□□□□ -0.51
HDAC4-216ENST00000544989 HEY1Q9Y5J3 304 aa11.85□□□□□ -0.51
HDAC4-216ENST00000544989 KNTC1P50748 2209 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 ARID1BQ8NFD5 2236 aaPredicted RBP11.84□□□□□ -0.51
HDAC4-216ENST00000544989 TNFRSF10CO14798 259 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 SIGLEC6O43699 453 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 ZNF189O75820 626 aaPredicted RBP11.84□□□□□ -0.51
HDAC4-216ENST00000544989 HEXIM1O94992 359 aaKnown RBP11.84□□□□□ -0.51
HDAC4-216ENST00000544989 RASGRP1O95267 797 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 GP1BAP07359 652 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 CKMT1AP12532 417 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 TNNT1P13805 278 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 TSHRP16473 764 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 TEAD1P28347 426 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 TRIM23P36406 574 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 CDKN2BP42772 138 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 RPIAP49247 311 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 ACADVLP49748 655 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 NAP1L1P55209 391 aaKnown RBP11.84□□□□□ -0.51
HDAC4-216ENST00000544989 KIAA1024LP59773 190 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 COPS2P61201 443 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 DAB2P98082 770 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 AP1B1Q10567 949 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 TRAF2Q12933 501 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 EIF2B5Q13144 721 aaKnown RBP11.84□□□□□ -0.51
HDAC4-216ENST00000544989 INPP5AQ14642 412 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 SLC14A2Q15849 920 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 TAZQ16635 292 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 TFDP3Q5H9I0 405 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 FAXCQ5TGI0 409 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 ESRP1Q6NXG1 681 aaKnown RBP11.84□□□□□ -0.51
HDAC4-216ENST00000544989 ZCCHC8Q6NZY4 707 aaKnown RBP11.84□□□□□ -0.51
HDAC4-216ENST00000544989 LVRNQ6Q4G3 990 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 CCNI2Q6ZMN8 369 aaPredicted RBP11.84□□□□□ -0.51
HDAC4-216ENST00000544989 GAS2L3Q86XJ1 694 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 PHACTR4Q8IZ21 702 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 CACTIN-AS1Q8N1I8 211 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 PNPLA1Q8N8W4 532 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 EXD1Q8NHP7 514 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 UBE2Q2Q8WVN8 375 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 GATA6Q92908 595 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 NUS1Q96E22 293 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 COQ10AQ96MF6 247 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 WDR92Q96MX6 357 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 OLFM3Q96PB7 478 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 IL12RB2Q99665 862 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 FERMT1Q9BQL6 677 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
HDAC4-216ENST00000544989 ADGRE3Q9BY15 652 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 WDR26Q9H7D7 661 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 MBNL1Q9NR56 388 aaKnown RBP11.84□□□□□ -0.51
HDAC4-216ENST00000544989 KLQ9UEF7 1012 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 SALL4Q9UJQ4 1053 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 KLK13Q9UKR3 277 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 COQ6Q9Y2Z9 468 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 TTLL3Q9Y4R7 772 aa11.84□□□□□ -0.51
HDAC4-216ENST00000544989 SHROOM3Q8TF72 1996 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 SOWAHDA6NJG2 315 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 LMO7DNF2Z398 122 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 K7ESM1 405 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 TRIM38O00635 465 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 FFAR2O15552 330 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 FZD6O60353 706 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 JCHAINP01591 159 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 PCCBP05166 539 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 ANXA6P08133 673 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 CTSEP14091 401 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 VAV2P52735 878 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 HK3P52790 923 aa11.83□□□□□ -0.52
HDAC4-216ENST00000544989 SLC10A2Q12908 348 aaPredicted RBP11.83□□□□□ -0.52
HDAC4-216ENST00000544989 CNGA3Q16281 694 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms